ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123136823	protein TIC 21, chloroplastic
tae-r.2	123127222	protein TIC 21, chloroplastic
tae-r.2	123144303	protein TIC 21, chloroplastic
tae-r.2	123149602	protein TIC 21, chloroplastic
hvu-r.1	123402870	protein TIC 21, chloroplastic-like
hvu-r.1	123407669	protein TIC 21, chloroplastic-like
bdi-r.1	100830265	protein TIC 21, chloroplastic
bdi-r.1	100821506	protein TIC 21, chloroplastic
osa-u.5	4341611	protein TIC 21, chloroplastic
osa-u.5	4328550	protein TIC 21, chloroplastic
zma-u.5	100276397	uncharacterized LOC100276397
zma-u.5	100273175	uncharacterized LOC100273175
zma-u.5	100276039	Protein TIC 21 chloroplastic
sbi-r.1	8083497	protein TIC 21, chloroplastic
sbi-r.1	8079428	protein TIC 21, chloroplastic
ath-u.5	TIC21	translocon at inner membrane of chloroplasts 21
gma-u.5	100775427	uncharacterized LOC100775427
gma-u.5	100807031	protein TIC 21, chloroplastic
sly-u.5	101252331	protein TIC 21, chloroplastic
bra-r.6	103828482	protein TIC 21, chloroplastic
bra-r.6	103847988	protein TIC 21, chloroplastic
vvi-u.5	100255605	protein TIC 21, chloroplastic
ppo-u.5	7457556	protein TIC 21, chloroplastic
ppo-u.5	7465042	protein TIC 21, chloroplastic
mtr-u.5	25485416	protein TIC 21, chloroplastic
ghi-r.1	121225671	protein TIC 21, chloroplastic
ghi-r.1	107935023	protein TIC 21, chloroplastic
ghi-r.1	107908879	protein TIC 21, chloroplastic
bna-r.1	106431174	protein TIC 21, chloroplastic-like
bna-r.1	106446257	protein TIC 21, chloroplastic-like
bna-r.1	106371533	protein TIC 21, chloroplastic-like
sot-r.1	102604607	protein TIC 21, chloroplastic
cit-r.1	102608747	protein TIC 21, chloroplastic
nta-r.1	107789455	protein TIC 21, chloroplastic
nta-r.1	107816756	protein TIC 21, chloroplastic-like

Top 50 coexpressed genes to 123136823 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123136823 (tae-r.2 coexpression data)

CoexMap"123136823"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044412262.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for XP_044412262.1)

Subcellular
localization
TargetP

mito 7, chlo 3

(predict for XP_044412262.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123136823	tae-r.2 for 123127222	tae-r.2 for 123144303	tae-r.2 for 123149602	hvu-r.1 for 123402870	hvu-r.1 for 123407669	bdi-r.1 for 100830265	bdi-r.1 for 100821506	osa-u.5 for 4341611	osa-u.5 for 4328550	zma-u.5 for 100276397	zma-u.5 for 100273175	zma-u.5 for 100276039	sbi-r.1 for 8083497	sbi-r.1 for 8079428	ath-u.5 for TIC21	gma-u.5 for 100775427	gma-u.5 for 100807031	sly-u.5 for 101252331	bra-r.6 for 103828482	bra-r.6 for 103847988	vvi-u.5 for 100255605	ppo-u.5 for 7457556	ppo-u.5 for 7465042	mtr-u.5 for 25485416	ghi-r.1 for 121225671	ghi-r.1 for 107935023	ghi-r.1 for 107908879	bna-r.1 for 106431174	bna-r.1 for 106446257	bna-r.1 for 106371533	sot-r.1 for 102604607	cit-r.1 for 102608747	nta-r.1 for 107789455	nta-r.1 for 107816756

Ortholog

Ortholog ID: 5054

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

TIC21

Function^*

protein TIC 21, chloroplastic

protein TIC 21, chloroplastic-like

protein TIC 21, chloroplastic

uncharacterized LOC100276397

uncharacterized LOC100273175

Protein TIC 21 chloroplastic

protein TIC 21, chloroplastic

translocon at inner membrane of chloroplasts 21

uncharacterized LOC100775427

protein TIC 21, chloroplastic

protein TIC 21, chloroplastic-like

protein TIC 21, chloroplastic

protein TIC 21, chloroplastic-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	2
tae01230	Biosynthesis of amino acids	2
tae01240	Biosynthesis of cofactors	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	6
tae00860	Porphyrin metabolism	3
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3
tae00260	Glycine, serine and threonine metabolism	2
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	7
bdi00250	Alanine, aspartate and glutamate metabolism	3
bdi00300	Lysine biosynthesis	3
bdi00220	Arginine biosynthesis	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3
zma00010	Glycolysis / Gluconeogenesis	2
zma00710	Carbon fixation by Calvin cycle	2
zma01200	Carbon metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	3
ath01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00061	Fatty acid biosynthesis	3
gma01200	Carbon metabolism	3
gma01212	Fatty acid metabolism	3
gma00620	Pyruvate metabolism	2
gma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	3
gma03010	Ribosome	3
gma00290	Valine, leucine and isoleucine biosynthesis	2
gma00660	C5-Branched dibasic acid metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	3
sly01210	2-Oxocarboxylic acid metabolism	2
sly00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4
bra01230	Biosynthesis of amino acids	3
bra00340	Histidine metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01210	2-Oxocarboxylic acid metabolism	4
vvi00010	Glycolysis / Gluconeogenesis	4
vvi00620	Pyruvate metabolism	4
vvi01200	Carbon metabolism	4
vvi01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03018	RNA degradation	3
ppo03040	Spliceosome	2
ppo04144	Endocytosis	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	4
mtr00061	Fatty acid biosynthesis	3
mtr01212	Fatty acid metabolism	3
mtr00290	Valine, leucine and isoleucine biosynthesis	2
mtr00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00730	Thiamine metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00340	Histidine metabolism	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	4
bna00340	Histidine metabolism	2
bna00260	Glycine, serine and threonine metabolism	2
bna00261	Monobactam biosynthesis	2
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	4
bna00340	Histidine metabolism	2
bna00260	Glycine, serine and threonine metabolism	2
bna00261	Monobactam biosynthesis	2
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	3
sot01230	Biosynthesis of amino acids	2
sot00061	Fatty acid biosynthesis	2
sot01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

123136823

123144303

123149602

123402870

123407669

100830265

100821506

4341611

4328550

100276397

100273175

100276039

8083497

8079428

816018

100775427

100807031

101252331

103828482

103847988

100255605

7457556

7465042

25485416

107935023

107908879

107894301

106431174

106446257

106371533

102604607

102608747

107789455

107816756

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	3	2	1	2	1	2	1	2	1	3	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123136823 (tae-r.2 coexpression data)

Top 50 enrichment test to 123136823 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**