Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  125580469  30S ribosomal protein S20, chloroplastic-like 
 bna-r.1  125603865  30S ribosomal protein S20, chloroplastic-like 
 bna-r.1  111215700  30S ribosomal protein S20, chloroplastic-like 
 bna-r.1  106439404  30S ribosomal protein S20, chloroplastic-like 
 bra-r.6  103869949  30S ribosomal protein S20, chloroplastic 
 bra-r.6  103859614  30S ribosomal protein S20, chloroplastic 
 bra-r.6  103841657  30S ribosomal protein S20, chloroplastic 
 ath-u.5  PRPS20  chloroplast 30S ribosomal protein S20 
 ghi-r.1  107948757  30S ribosomal protein S20, chloroplastic 
 ghi-r.1  107944081  30S ribosomal protein S20, chloroplastic 
 cit-r.1  102616817  30S ribosomal protein S20, chloroplastic 
 gma-u.5  100786192  30S ribosomal protein S20, chloroplastic-like 
 gma-u.5  100499656  30S ribosomal protein S20, chloroplastic 
 vvi-u.5  100265925  small ribosomal subunit protein bS20c 
 ppo-u.5  18095545  30S ribosomal protein S20, chloroplastic 
 mtr-u.5  11413544  30S ribosomal protein S20, chloroplastic 
 sly-u.5  101261139  small ribosomal subunit protein bS20c 
 sot-r.1  102597213  30S ribosomal protein S20, chloroplastic 
 nta-r.1  107812357  small ribosomal subunit protein bS20c 
 nta-r.1  107805834  small ribosomal subunit protein bS20c 
 nta-r.1  107776799  small ribosomal subunit protein bS20c-like 
 osa-u.5  ASL1  Albino Seedling Lethal1 
 zma-u.5  100286220  30S ribosomal protein S20, chloroplastic-like 
 tae-r.2  123061887  30S ribosomal protein S20, chloroplastic 
 tae-r.2  123070582  30S ribosomal protein S20, chloroplastic 
 tae-r.2  123078986  30S ribosomal protein S20, chloroplastic 
 hvu-r.1  123444104  30S ribosomal protein S20, chloroplastic 
 sbi-r.1  8068015  30S ribosomal protein S20, chloroplastic 
 bdi-r.1  100837078  30S ribosomal protein S20, chloroplastic 
 cre-r.1  CHLRE_12g494750v5  uncharacterized protein 

close


Top 50 coexpressed genes to 125580469 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 125580469 (bna-r.1 coexpression data)

CoexMap"125580469"


bnaLOC125580469 | Entrez gene ID : 125580469
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 2 1 2 1 1 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03010 [list] [network] Ribosome (7497 genes)
GO BP
GO:0006412 [list] [network] translation  (1842 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (421 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1367 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (60 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1340 genes)  IEA  
Protein XP_048600894.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048600894.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048600894.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
125580469


bna-r.1
for
125603865


bna-r.1
for
111215700


bna-r.1
for
106439404


bra-r.6
for
103869949


bra-r.6
for
103859614


bra-r.6
for
103841657


ath-u.5
for
PRPS20


ghi-r.1
for
107948757


ghi-r.1
for
107944081


cit-r.1
for
102616817


gma-u.5
for
100786192


gma-u.5
for
100499656


vvi-u.5
for
100265925


ppo-u.5
for
18095545


mtr-u.5
for
11413544


sly-u.5
for
101261139


sot-r.1
for
102597213


nta-r.1
for
107812357


nta-r.1
for
107805834


nta-r.1
for
107776799


osa-u.5
for
ASL1


zma-u.5
for
100286220


tae-r.2
for
123061887


tae-r.2
for
123070582


tae-r.2
for
123078986


hvu-r.1
for
123444104


sbi-r.1
for
8068015


bdi-r.1
for
100837078


cre-r.1
for
CHLRE_12g494750v5



Ortholog ID: 5993
Species bna bna bna bra bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC125603865 LOC111215700 LOC106405949 LOC103869949 LOC103859614 LOC103841657 PRPS20 LOC107948757 LOC107944081 LOC102616817 LOC100786192 LOC100499656 LOC100265925 LOC18095545 LOC11413544 LOC101261139 LOC102597213 LOC107812357 LOC107805834 LOC107776799 ASL1 LOC100286220 LOC123061887 LOC123070582 LOC123078986 LOC123444104 LOC8068015 LOC100837078 CHLRE_12g494750v5
Function* 30S ribosomal protein S20, chloroplastic-like 30S ribosomal protein S20, chloroplastic-like 30S ribosomal protein S20, chloroplastic-like 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic chloroplast 30S ribosomal protein S20 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic-like 30S ribosomal protein S20, chloroplastic small ribosomal subunit protein bS20c 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic small ribosomal subunit protein bS20c 30S ribosomal protein S20, chloroplastic small ribosomal subunit protein bS20c small ribosomal subunit protein bS20c small ribosomal subunit protein bS20c-like Albino Seedling Lethal1 30S ribosomal protein S20, chloroplastic-like 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic 30S ribosomal protein S20, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
ath01240 Biosynthesis of cofactors 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit00195 Photosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125603865 111215700 106405949 103869949 103859614 103841657 820750 107948757 107944081 102616817 100786192 100499656 100265925 18095545 11413544 101261139 102597213 107812357 107805834 107776799 4325273 100286220 123061887 123070582 123078986 123444104 8068015 100837078 5726079
The preparation time of this page was 0.1 [sec].