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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125610056   cysteine synthase 2-like 
 bna-r.1   106415385   cysteine synthase 2 
 bra-r.6   103871013   cysteine synthase 2 
 ath-u.5   AT1G55880   Pyridoxal-5'-phosphate-dependent enzyme family protein 
 ghi-r.1   107922294   cysteine synthase 2 
 ghi-r.1   107931162   cysteine synthase 2 
 cit-r.1   102610473   cysteine synthase 2 
 gma-u.5   100799081   cysteine synthase 2 
 vvi-u.5   100260099   cysteine synthase 2 
 ppo-u.5   7485110   cysteine synthase 2 
 mtr-u.5   11436130   cysteine synthase 2 
 sly-u.5   101253301   cysteine synthase 2 
 sot-r.1   102585362   cysteine synthase 2 
 nta-r.1   107826345   cysteine synthase 2-like 
 nta-r.1   107776762   cysteine synthase 2 
 osa-u.5   4332062   cysteine synthase 2 
 zma-u.5   100193476   uncharacterized LOC100193476 
 tae-r.2   123092962   cysteine synthase 2 
 tae-r.2   123085269   cysteine synthase 2 
 tae-r.2   123098234   cysteine synthase 2 
 hvu-r.1   123449306   cysteine synthase 2 
 sbi-r.1   8056886   cysteine synthase 
 bdi-r.1   100832897   cysteine synthase 2 
 cre-r.1   CHLRE_16g664250v5   uncharacterized protein 

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Top 50 coexpressed genes to 125610056 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125610056 (bna-r.1 coexpression data)

CoexMap"125610056"


bnaLOC125610056 | Entrez gene ID : 125610056    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00270 [list] [network] Cysteine and methionine metabolism (398 genes)
bna00920 [list] [network] Sulfur metabolism (129 genes)
bna01200 [list] [network] Carbon metabolism (888 genes)
bna01230 [list] [network] Biosynthesis of amino acids (773 genes)
bna01320 [list] [network] Sulfur cycle (69 genes)
GO BP
GO:0006535 [list] [network] cysteine biosynthetic process from serine  (47 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004124 [list] [network] cysteine synthase activity  (32 genes)  IEA  
Protein XP_048637678.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  vacu 4,  nucl 1,  mito 1,  extr 1,  E.R. 1  (predict for XP_048637678.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_048637678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125610056
bna-r.1
for
106415385
bra-r.6
for
103871013
ath-u.5
for
AT1G55880
ghi-r.1
for
107922294
ghi-r.1
for
107931162
cit-r.1
for
102610473
gma-u.5
for
100799081
vvi-u.5
for
100260099
ppo-u.5
for
7485110
mtr-u.5
for
11436130
sly-u.5
for
101253301
sot-r.1
for
102585362
nta-r.1
for
107826345
nta-r.1
for
107776762
osa-u.5
for
4332062
zma-u.5
for
100193476
tae-r.2
for
123092962
tae-r.2
for
123085269
tae-r.2
for
123098234
hvu-r.1
for
123449306
sbi-r.1
for
8056886
bdi-r.1
for
100832897
cre-r.1
for
CHLRE_16g664250v5


Ortholog ID: 11092
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC125610056 LOC106415385 LOC103871013 AT1G55880 LOC107922294 LOC107931162 LOC102610473 LOC100799081 LOC100260099 LOC7485110 LOC11436130 LOC101253301 LOC102585362 LOC107826345 LOC107776762 LOC4332062 LOC100193476 LOC123092962 LOC123085269 LOC123098234 LOC123449306 LOC8056886 LOC100832897 CHLRE_16g664250v5
Function* cysteine synthase 2-like cysteine synthase 2 cysteine synthase 2 Pyridoxal-5'-phosphate-dependent enzyme family protein cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2-like cysteine synthase 2 cysteine synthase 2 uncharacterized LOC100193476 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase cysteine synthase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03420 Nucleotide excision repair 2
hvu03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125610056 106415385 103871013 842038 107922294 107931162 102610473 100799081 100260099 7485110 11436130 101253301 102585362 107826345 107776762 4332062 100193476 123092962 123085269 123098234 123449306 8056886 100832897 5726998
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