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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-u.5   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-r.7   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-m.9   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-e.2   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-m.4.bio   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-m.4.hor   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-m.4.str   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-m.4.tis   AT3G12170   Chaperone DnaJ-domain superfamily protein 
 ath-u.5   ATJ6   J-domain protein 6 
 bra-r.6   103845735   chaperone protein dnaJ 6 
 bra-r.6   103870266   chaperone protein dnaJ 6 
 bna-r.1   106435404   chaperone protein dnaJ 6 
 bna-r.1   106351783   chaperone protein dnaJ 6 
 bna-r.1   106417659   chaperone protein dnaJ 6 
 ghi-r.1   121213999   chaperone protein dnaJ 6 
 ghi-r.1   107921218   chaperone protein dnaJ 6 
 ghi-r.1   107920917   chaperone protein dnaJ 6 
 cit-r.1   102612826   chaperone protein dnaJ 6 
 gma-u.5   100811936   chaperone protein dnaJ 6 
 gma-u.5   100793909   chaperone protein dnaJ 6 
 gma-u.5   100781463   chaperone protein dnaJ 6 
 vvi-u.5   100265910   chaperone protein dnaJ 6 
 ppo-u.5   18099846   chaperone protein dnaJ 6 
 ppo-u.5   7484001   chaperone protein dnaJ 6 
 mtr-u.5   11430798   chaperone protein dnaJ 6 
 sly-u.5   101259895   chaperone protein dnaJ 6 
 sot-r.1   102583863   chaperone protein dnaJ 6 
 nta-r.1   107800344   chaperone protein dnaJ 6 
 nta-r.1   107800321   chaperone protein dnaJ 6 
 nta-r.1   107779970   chaperone protein dnaJ 6-like 
 osa-u.5   4328613   uncharacterized LOC4328613 
 zma-u.5   103628274   chaperone protein dnaJ 6 
 zma-u.5   100284400   chaperone protein dnaJ 6 
 zma-u.5   100273764   Chaperone protein dnaJ 6 
 tae-r.2   123144210   chaperone protein dnaJ 6 
 tae-r.2   123132581   chaperone protein dnaJ 6 
 tae-r.2   123136732   chaperone protein dnaJ 6 
 hvu-r.1   123402012   chaperone protein dnaJ 6-like 
 sbi-r.1   8071630   chaperone protein dnaJ 6 
 bdi-r.1   100843570   chaperone protein dnaJ 6 
 cre-r.1   CHLRE_09g389550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G12170 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G12170 (ath-m.4.lig coexpression data)

CoexMap"820394"


athAT3G12170 | Entrez gene ID : 820394      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 1 2 1 1 1 3 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001325582.1 [sequence] [blastp]
NP_187824.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001325582.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_187824.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001325582.1)
other 8  (predict for NP_187824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT3G12170
ath-u.5
for
AT3G12170
ath-r.7
for
AT3G12170
ath-m.9
for
AT3G12170
ath-e.2
for
AT3G12170
ath-m.4.bio
for
AT3G12170
ath-m.4.hor
for
AT3G12170
ath-m.4.str
for
AT3G12170
ath-m.4.tis
for
AT3G12170
ath-u.5
for
ATJ6
bra-r.6
for
103845735
bra-r.6
for
103870266
bna-r.1
for
106435404
bna-r.1
for
106351783
bna-r.1
for
106417659
ghi-r.1
for
121213999
ghi-r.1
for
107921218
ghi-r.1
for
107920917
cit-r.1
for
102612826
gma-u.5
for
100811936
gma-u.5
for
100793909
gma-u.5
for
100781463
vvi-u.5
for
100265910
ppo-u.5
for
18099846
ppo-u.5
for
7484001
mtr-u.5
for
11430798
sly-u.5
for
101259895
sot-r.1
for
102583863
nta-r.1
for
107800344
nta-r.1
for
107800321
nta-r.1
for
107779970
osa-u.5
for
4328613
zma-u.5
for
103628274
zma-u.5
for
100284400
zma-u.5
for
100273764
tae-r.2
for
123144210
tae-r.2
for
123132581
tae-r.2
for
123136732
hvu-r.1
for
123402012
sbi-r.1
for
8071630
bdi-r.1
for
100843570
cre-r.1
for
CHLRE_09g389550v5


Ortholog ID: 5296
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G12170 ATJ6 LOC103845735 LOC103870266 LOC106435404 LOC106351783 LOC106452402 LOC121213999 LOC107920917 LOC107916598 LOC102612826 LOC100811936 LOC100793909 LOC100781463 LOC100265910 LOC18099846 LOC7484001 LOC11430798 LOC101259895 LOC102583863 LOC107800344 LOC107800321 LOC107779970 LOC4328613 LOC103628274 LOC100284400 LOC100273764 LOC123144210 LOC123132581 LOC123136732 LOC123402012 LOC8071630 LOC100843570 CHLRE_09g389550v5
Function* Chaperone DnaJ-domain superfamily protein J-domain protein 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6-like uncharacterized LOC4328613 chaperone protein dnaJ 6 chaperone protein dnaJ 6 Chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6 chaperone protein dnaJ 6-like chaperone protein dnaJ 6 chaperone protein dnaJ 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 3
ath03040 Spliceosome 3
ath03030 DNA replication 3
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 6
bra03030 DNA replication 5
bra03420 Nucleotide excision repair 5
bra03430 Mismatch repair 5
bra03460 Fanconi anemia pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 7
bna03030 DNA replication 5
bna03420 Nucleotide excision repair 5
bna03430 Mismatch repair 5
bna03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 7
bna03030 DNA replication 5
bna03420 Nucleotide excision repair 5
bna03430 Mismatch repair 5
bna03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi00561 Glycerolipid metabolism 2
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit03420 Nucleotide excision repair 2
cit03082 ATP-dependent chromatin remodeling 2
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 5
gma03040 Spliceosome 5
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi03410 Base excision repair 2
vvi03030 DNA replication 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 10
ppo03420 Nucleotide excision repair 3
ppo03440 Homologous recombination 3
ppo03430 Mismatch repair 2
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03420 Nucleotide excision repair 3
sot03430 Mismatch repair 3
sot03440 Homologous recombination 3
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03460 Fanconi anemia pathway 3
nta03410 Base excision repair 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03460 Fanconi anemia pathway 3
nta03420 Nucleotide excision repair 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 7
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 3
hvu03420 Nucleotide excision repair 3
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03440 Homologous recombination 3
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820394 830582 103845735 103870266 106435404 106351783 106452402 121213999 107920917 107916598 102612826 100811936 100793909 100781463 100265910 18099846 7484001 11430798 101259895 102583863 107800344 107800321 107779970 4328613 103628274 100284400 100273764 123144210 123132581 123136732 123402012 8071630 100843570 5720052
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