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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT4G15720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 cit-r.1   102618955   pentatricopeptide repeat-containing protein At4g15720 
 vvi-u.5   100249494   pentatricopeptide repeat-containing protein At4g15720 
 mtr-u.5   11411669   pentatricopeptide repeat-containing protein At4g15720 
 osa-u.5   4351584   pentatricopeptide repeat-containing protein At4g15720 
 zma-u.5   100280005   uncharacterized LOC100280005 
 tae-r.2   123164442   pentatricopeptide repeat-containing protein At4g15720 
 tae-r.2   123155987   pentatricopeptide repeat-containing protein At4g15720 
 hvu-r.1   123413114   pentatricopeptide repeat-containing protein At4g15720 
 sbi-r.1   8073483   pentatricopeptide repeat-containing protein At4g15720 
 bdi-r.1   100834971   pentatricopeptide repeat-containing protein At4g15720 

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Top 50 coexpressed genes to AT4G15720 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G15720 (ath-m.4.lig coexpression data)

CoexMap"827250"


athAT4G15720 | Entrez gene ID : 827250      
Species ath cit vvi mtr osa zma tae hvu sbi bdi ppo gma bra bna cre sly ghi sot nta
Paralog 6 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_193307.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  nucl 1,  vacu 1  (predict for NP_193307.2)
Subcellular
localization
TargetP
other 4  (predict for NP_193307.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT4G15720
ath-m.9
for
AT4G15720
ath-m.4.bio
for
AT4G15720
ath-m.4.hor
for
AT4G15720
ath-m.4.str
for
AT4G15720
ath-m.4.tis
for
AT4G15720
cit-r.1
for
102618955
vvi-u.5
for
100249494
mtr-u.5
for
11411669
osa-u.5
for
4351584
zma-u.5
for
100280005
tae-r.2
for
123164442
tae-r.2
for
123155987
hvu-r.1
for
123413114
sbi-r.1
for
8073483
bdi-r.1
for
100834971


Ortholog ID: 12447
Species cit vvi mtr osa zma tae tae hvu sbi bdi
Symbol LOC102618955 LOC100249494 LOC11411669 LOC4351584 LOC100280005 LOC123164442 LOC123155987 LOC123413114 LOC8073483 LOC100834971
Function* pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 uncharacterized LOC100280005 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr04120 Ubiquitin mediated proteolysis 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 9
tae04145 Phagosome 4
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi01240 Biosynthesis of cofactors 4
sbi00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102618955 100249494 11411669 4351584 100280005 123164442 123155987 123413114 8073483 100834971
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