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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100249494   pentatricopeptide repeat-containing protein At4g15720 
 vvi-r.5   100249494   pentatricopeptide repeat-containing protein At4g15720 
 mtr-u.5   11411669   pentatricopeptide repeat-containing protein At4g15720 
 osa-u.5   4351584   pentatricopeptide repeat-containing protein At4g15720 
 zma-u.5   100280005   uncharacterized LOC100280005 

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Top 50 coexpressed genes to 100249494 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100249494 (vvi-u.5 coexpression data)

CoexMap"100249494"


vviLOC100249494 | Entrez gene ID : 100249494      
Species vvi mtr osa zma sly sbi nta bra cre hvu cit bdi ppo sot tae ath bna ghi gma
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002276230.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002276230.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_002276230.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100249494

.
vvi-r.5
for
100249494

.
mtr-u.5
for
11411669

.
osa-u.5
for
4351584

.
zma-u.5
for
100280005

.


Ortholog ID: 12447
Species osa zma vvi mtr tae tae hvu sbi cit bdi
Symbol LOC4351584 LOC100280005 LOC100249494 LOC11411669 LOC123155987 LOC123164442 LOC123413114 LOC8073483 LOC102618955 LOC100834971
Function* pentatricopeptide repeat-containing protein At4g15720 uncharacterized LOC100280005 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720 pentatricopeptide repeat-containing protein At4g15720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr04120 Ubiquitin mediated proteolysis 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 9
tae04145 Phagosome 4
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi01240 Biosynthesis of cofactors 4
sbi00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4351584 100280005 100249494 11411669 123155987 123164442 123413114 8073483 102618955 100834971
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