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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   FHL   far-red-elongated hypocotyl1-like protein 
 ath-u.5   FHL   far-red-elongated hypocotyl1-like protein 
 ath-r.7   FHL   far-red-elongated hypocotyl1-like protein 
 ath-m.9   FHL   far-red-elongated hypocotyl1-like protein 
 ath-e.2   FHL   far-red-elongated hypocotyl1-like protein 
 ath-m.4.bio   FHL   far-red-elongated hypocotyl1-like protein 
 ath-m.4.hor   FHL   far-red-elongated hypocotyl1-like protein 
 ath-m.4.str   FHL   far-red-elongated hypocotyl1-like protein 
 ath-m.4.tis   FHL   far-red-elongated hypocotyl1-like protein 
 bra-r.6   103847470   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 bna-r.1   106370713   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 bna-r.1   106433529   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like 

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Top 50 coexpressed genes to FHL (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FHL (ath-m.4.lig coexpression data)

CoexMap"830832"


athFHL | Entrez gene ID : 830832      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051457 [list] [network] maintenance of protein location in nucleus  (4 genes)  IMP  
GO:0031048 [list] [network] regulatory ncRNA-mediated heterochromatin formation  (50 genes)  ISS  
GO:0010218 [list] [network] response to far red light  (57 genes)  IDA IGI  
GO:0009637 [list] [network] response to blue light  (94 genes)  IMP  
GO:0009639 [list] [network] response to red or far red light  (221 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  ISS  
GO CC
GO:0016607 [list] [network] nuclear speck  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078521.1 [sequence] [blastp]
NP_195840.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001078521.1)
nucl 10  (predict for NP_195840.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078521.1)
other 8  (predict for NP_195840.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
FHL
ath-u.5
for
FHL
ath-r.7
for
FHL
ath-m.9
for
FHL
ath-e.2
for
FHL
ath-m.4.bio
for
FHL
ath-m.4.hor
for
FHL
ath-m.4.str
for
FHL
ath-m.4.tis
for
FHL
bra-r.6
for
103847470
bna-r.1
for
106370713
bna-r.1
for
106433529


Ortholog ID: 22878
Species ath bra bna bna
Symbol FHL LOC103847470 LOC106370713 LOC106433529
Function* far-red-elongated hypocotyl1-like protein protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra00380 Tryptophan metabolism 2
bra00460 Cyanoamino acid metabolism 2
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830832 103847470 106370713 106433529
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