Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   TFL2   uncharacterized protein 
 ath-u.5   TFL2   uncharacterized protein 
 ath-r.7   TFL2   uncharacterized protein 
 ath-m.9   TFL2   uncharacterized protein 
 ath-e.2   TFL2   uncharacterized protein 
 ath-m.4.bio   TFL2   uncharacterized protein 
 ath-m.4.hor   TFL2   uncharacterized protein 
 ath-m.4.str   TFL2   uncharacterized protein 
 ath-m.4.tis   TFL2   uncharacterized protein 
 bra-r.6   103851120   chromo domain-containing protein LHP1 
 bra-r.6   103833195   chromo domain-containing protein LHP1 
 bna-r.1   106387742   chromo domain-containing protein LHP1 
 ghi-r.1   121223295   chromo domain protein LHP1-like 
 ghi-r.1   121223292   chromo domain protein LHP1-like 
 ghi-r.1   107963334   chromo domain-containing protein LHP1 
 cit-r.1   102624337   chromo domain-containing protein LHP1 
 gma-u.5   LHP1-2   chromo domain-containing protein LHP1-2 
 gma-u.5   100807755   chromo domain protein LHP1-like 
 vvi-u.5   100250685   chromo domain-containing protein LHP1 
 ppo-u.5   7493863   chromo domain-containing protein LHP1 
 ppo-u.5   7459206   chromo domain-containing protein LHP1 
 mtr-u.5   112417529   chromo domain-containing protein LHP1 
 mtr-u.5   112420461   chromo domain-containing protein LHP1 
 sly-u.5   LHP1   chromo domain protein LHP1 
 sot-r.1   102593818   chromo domain protein LHP1-like 
 sot-r.1   102585992   chromo domain protein LHP1 
 nta-r.1   107765019   chromo domain protein LHP1 
 nta-r.1   107782712   chromo domain protein LHP1 
 nta-r.1   107807769   chromo domain protein LHP1-like 
 osa-u.5   9268323   probable chromo domain-containing protein LHP1 
 zma-u.5   541970   chromdomain-containing protein CRD101 
 tae-r.2   123156764   probable chromo domain-containing protein LHP1 
 tae-r.2   123165199   probable chromo domain-containing protein LHP1 
 hvu-r.1   123407960   probable chromo domain-containing protein LHP1 
 sbi-r.1   8155636   probable chromo domain-containing protein LHP1 
 bdi-r.1   100833413   probable chromo domain-containing protein LHP1 

close


Top 50 coexpressed genes to TFL2 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to TFL2 (ath-m.4.lig coexpression data)

CoexMap"831635"


athTFL2 | Entrez gene ID : 831635      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 1 3 1 2 1 2 2 1 2 3 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010048 [list] [network] vernalization response  (18 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (43 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0031507 [list] [network] heterochromatin formation  (74 genes)  IEA  
GO:0048573 [list] [network] photoperiodism, flowering  (77 genes)  IMP  
GO:0009744 [list] [network] response to sucrose  (79 genes)  IEP  
GO:0009648 [list] [network] photoperiodism  (91 genes)  IMP  
GO:0045814 [list] [network] negative regulation of gene expression, epigenetic  (117 genes)  IMP  
GO:0010016 [list] [network] shoot system morphogenesis  (185 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IDA  
GO:0006325 [list] [network] chromatin organization  (231 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0000791 [list] [network] euchromatin  (13 genes)  IDA  
GO:0000792 [list] [network] heterochromatin  (13 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA IEA ISM  
GO MF
GO:0003935 [list] [network] GTP cyclohydrolase II activity  (3 genes)  IDA  
GO:0008686 [list] [network] 3,4-dihydroxy-2-butanone-4-phosphate synthase activity  (3 genes)  IDA  
GO:0003682 [list] [network] chromatin binding  (103 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330016.1 [sequence] [blastp]
NP_001330017.1 [sequence] [blastp]
NP_197271.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001330016.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001330017.1)
nucl 8,  cyto 1  (predict for NP_197271.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001330016.1)
other 7  (predict for NP_001330017.1)
other 7  (predict for NP_197271.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
TFL2
ath-u.5
for
TFL2
ath-r.7
for
TFL2
ath-m.9
for
TFL2
ath-e.2
for
TFL2
ath-m.4.bio
for
TFL2
ath-m.4.hor
for
TFL2
ath-m.4.str
for
TFL2
ath-m.4.tis
for
TFL2
bra-r.6
for
103851120
bra-r.6
for
103833195
bna-r.1
for
106387742
ghi-r.1
for
121223295
ghi-r.1
for
121223292
ghi-r.1
for
107963334
cit-r.1
for
102624337
gma-u.5
for
LHP1-2
gma-u.5
for
100807755
vvi-u.5
for
100250685
ppo-u.5
for
7493863
ppo-u.5
for
7459206
mtr-u.5
for
112417529
mtr-u.5
for
112420461
sly-u.5
for
LHP1
sot-r.1
for
102593818
sot-r.1
for
102585992
nta-r.1
for
107765019
nta-r.1
for
107782712
nta-r.1
for
107807769
osa-u.5
for
9268323
zma-u.5
for
541970
tae-r.2
for
123156764
tae-r.2
for
123165199
hvu-r.1
for
123407960
sbi-r.1
for
8155636
bdi-r.1
for
100833413


Ortholog ID: 4611
Species ath bra bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol TFL2 LOC103851120 LOC103833195 LOC106387742 LOC106426184 LOC121223295 LOC121223292 LOC107962677 LOC102624337 LHP1-2 LHP1-1 LOC100250685 LOC7493863 LOC7459206 LOC112417529 LOC112420461 LHP1 LOC102593818 LOC102585992 LOC107765019 LOC107782712 LOC107807769 LOC9268323 LOC541970 LOC123156764 LOC123165199 LOC123147798 LOC123407960 LOC8155636 LOC100833413
Function* uncharacterized protein chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1-like chromo domain protein LHP1-like chromo domain protein LHP1-like chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1-2 chromo domain-containing protein LHP1-1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain protein LHP1 chromo domain protein LHP1-like chromo domain protein LHP1 chromo domain protein LHP1 chromo domain protein LHP1 chromo domain protein LHP1-like probable chromo domain-containing protein LHP1 chromdomain-containing protein CRD101 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
gma04712 Circadian rhythm - plant 3
gma04820 Cytoskeleton in muscle cells 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831635 103851120 103833195 106387742 106426184 121223295 121223292 107962677 102624337 100812329 100782342 100250685 7493863 7459206 112417529 112420461 544233 102593818 102585992 107765019 107782712 107807769 9268323 541970 123156764 123165199 123147798 123407960 8155636 100833413
The preparation time of this page was 0.1 [sec].