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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541970   chromdomain-containing protein CRD101 
 zma-r.6   541970   chromdomain-containing protein CRD101 
 zma-m.5   541970   chromdomain-containing protein CRD101 
 osa-u.5   9268323   probable chromo domain-containing protein LHP1 
 ath-u.5   TFL2   uncharacterized protein 
 gma-u.5   LHP1-2   chromo domain-containing protein LHP1-2 
 gma-u.5   100807755   chromo domain protein LHP1-like 
 sly-u.5   LHP1   chromo domain protein LHP1 
 vvi-u.5   100250685   chromo domain-containing protein LHP1 
 ppo-u.5   7493863   chromo domain-containing protein LHP1 
 ppo-u.5   7459206   chromo domain-containing protein LHP1 
 mtr-u.5   112417529   chromo domain-containing protein LHP1 
 mtr-u.5   112420461   chromo domain-containing protein LHP1 

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Top 50 coexpressed genes to 541970 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541970 (zma-u.5 coexpression data)

CoexMap"541970"


zmaLOC541970 | Entrez gene ID : 541970      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031507 [list] [network] heterochromatin formation  (39 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
Protein NP_001105093.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001105093.1)
Subcellular
localization
TargetP
other 9,  mito 5  (predict for NP_001105093.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541970

.
zma-r.6
for
541970

.
zma-m.5
for
541970

.
osa-u.5
for
9268323

.
ath-u.5
for
TFL2

.
gma-u.5
for
LHP1-2

.
gma-u.5
for
100807755

.
sly-u.5
for
LHP1

.
vvi-u.5
for
100250685

.
ppo-u.5
for
7493863

.
ppo-u.5
for
7459206

.
mtr-u.5
for
112417529

.
mtr-u.5
for
112420461

.


Ortholog ID: 4611
Species ath gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol TFL2 LHP1-1 LHP1 LOC9268323 LOC541970 LOC103833195 LOC103851120 LOC100250685 LOC7459206 LOC7493863 LOC112420461 LOC112417529 LOC123165199 LOC123147798 LOC123407960 LOC107962677 LOC121223292 LOC106387742 LOC106426184 LOC8155636 LOC102593818 LOC102585992 LOC102624337 LOC100833413 LOC107807769 LOC107765019
Function* uncharacterized protein chromo domain-containing protein LHP1-1 chromo domain protein LHP1 probable chromo domain-containing protein LHP1 chromdomain-containing protein CRD101 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain protein LHP1-like chromo domain-containing protein LHP1 chromo domain-containing protein LHP1-like probable chromo domain-containing protein LHP1 chromo domain protein LHP1-like chromo domain protein LHP1 chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 chromo domain protein LHP1-like chromo domain protein LHP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831635 100782342 544233 9268323 541970 103833195 103851120 100250685 7459206 7493863 112420461 112417529 123165199 123147798 123407960 107962677 121223292 106387742 106426184 8155636 102593818 102585992 102624337 100833413 107807769 107765019
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