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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   CYCA1;1   Cyclin A1;1 
 ath-u.5   CYCA1;1   Cyclin A1;1 
 ath-r.7   CYCA1;1   Cyclin A1;1 
 ath-m.9   CYCA1;1   Cyclin A1;1 
 ath-e.2   CYCA1;1   Cyclin A1;1 
 ath-m.4.bio   CYCA1;1   Cyclin A1;1 
 ath-m.4.hor   CYCA1;1   Cyclin A1;1 
 ath-m.4.str   CYCA1;1   Cyclin A1;1 
 ath-m.4.tis   CYCA1;1   Cyclin A1;1 
 bra-r.6   103851094   cyclin-A1-1 
 bra-r.6   103868732   cyclin-A1-1 
 bna-r.1   106354423   cyclin-A1-1 
 bna-r.1   111213687   cyclin-A1-1-like 
 ghi-r.1   107951959   cyclin-A1-1 
 ghi-r.1   121229515   cyclin-A1-1 
 ghi-r.1   121210909   cyclin-A1-1 
 cit-r.1   102617267   cyclin-A1-1 
 cit-r.1   102616765   cyclin-A1-4-like 
 gma-u.5   100789565   cyclin-A1-1 
 gma-u.5   CYCA1;1   mitotic cyclin a2-type 
 gma-u.5   100798216   cyclin-A1-4 
 vvi-u.5   100250590   cyclin-A1-1 
 ppo-u.5   18096203   cyclin-A1-1 
 ppo-u.5   7460975   cyclin-A1-1 
 mtr-u.5   25489689   cyclin-A1-1 
 sly-u.5   CycA1   cyclin A1 
 sot-r.1   102582879   cyclin-A1-4 
 nta-r.1   107783616   cyclin-A1-4-like 
 nta-r.1   107794571   cyclin-A1-4-like 
 osa-u.5   4338177   cyclin-A1-4-like 
 osa-u.5   4324288   cyclin-A1-1-like 
 zma-u.5   103649996   cyclin-A1-1-like 
 zma-u.5   103635708   cyclin-A1-4 
 zma-u.5   542336   cyclin 2 
 tae-r.2   123180860   cyclin-A1-4 
 tae-r.2   123112975   cyclin-A1-4 
 tae-r.2   123078098   cyclin-A1-4 
 hvu-r.1   123443271   cyclin-A1-2-like 
 sbi-r.1   8078082   cyclin-A1-3 
 sbi-r.1   8054654   cyclin-A1-1 
 bdi-r.1   100844452   cyclin-A1-1-like 
 bdi-r.1   100822112   cyclin-A1-4-like 
 bdi-r.1   100845679   cyclin-A1-1-like 
 cre-r.1   CHLRE_03g207900v5   uncharacterized protein 

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Top 50 coexpressed genes to CYCA1;1 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYCA1;1 (ath-m.4.lig coexpression data)

CoexMap"841014"


athCYCA1;1 | Entrez gene ID : 841014      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 2 3 2 3 1 2 1 1 1 2 2 3 3 1 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_175077.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_175077.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_175077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
CYCA1;1
ath-u.5
for
CYCA1;1
ath-r.7
for
CYCA1;1
ath-m.9
for
CYCA1;1
ath-e.2
for
CYCA1;1
ath-m.4.bio
for
CYCA1;1
ath-m.4.hor
for
CYCA1;1
ath-m.4.str
for
CYCA1;1
ath-m.4.tis
for
CYCA1;1
bra-r.6
for
103851094
bra-r.6
for
103868732
bna-r.1
for
106354423
bna-r.1
for
111213687
ghi-r.1
for
107951959
ghi-r.1
for
121229515
ghi-r.1
for
121210909
cit-r.1
for
102617267
cit-r.1
for
102616765
gma-u.5
for
100789565
gma-u.5
for
CYCA1;1
gma-u.5
for
100798216
vvi-u.5
for
100250590
ppo-u.5
for
18096203
ppo-u.5
for
7460975
mtr-u.5
for
25489689
sly-u.5
for
CycA1
sot-r.1
for
102582879
nta-r.1
for
107783616
nta-r.1
for
107794571
osa-u.5
for
4338177
osa-u.5
for
4324288
zma-u.5
for
103649996
zma-u.5
for
103635708
zma-u.5
for
542336
tae-r.2
for
123180860
tae-r.2
for
123112975
tae-r.2
for
123078098
hvu-r.1
for
123443271
sbi-r.1
for
8078082
sbi-r.1
for
8054654
bdi-r.1
for
100844452
bdi-r.1
for
100822112
bdi-r.1
for
100845679
cre-r.1
for
CHLRE_03g207900v5


Ortholog ID: 3398
Species ath bra bra bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi bdi cre
Symbol CYCA1;1 LOC103851094 LOC103868732 LOC111213687 LOC106397629 LOC107951959 LOC121210909 LOC107940547 LOC102617267 LOC102616765 LOC100789565 LOC100798216 LOC100776207 LOC100250590 LOC18096203 LOC7460975 LOC25489689 CycA1 LOC102582879 LOC107783616 LOC107794571 LOC4338177 LOC9268829 LOC103649996 LOC103635708 LOC542336 LOC123180860 LOC123112975 LOC123077889 LOC123443271 LOC8078082 LOC8054654 LOC100844452 LOC100822112 LOC100845679 CHLRE_03g207900v5
Function* Cyclin A1;1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1-like cyclin-A1-1-like cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-4-like cyclin-A1-1 cyclin-A1-4 cyclin-A1-1-like cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin A1 cyclin-A1-4 cyclin-A1-4-like cyclin-A1-4-like cyclin-A1-4-like cyclin-A1-3-like cyclin-A1-1-like cyclin-A1-4 cyclin 2 cyclin-A1-4 cyclin-A1-4 cyclin-A1-2 cyclin-A1-2-like cyclin-A1-3 cyclin-A1-1 cyclin-A1-1-like cyclin-A1-4-like cyclin-A1-1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841014 103851094 103868732 111213687 106397629 107951959 121210909 107940547 102617267 102616765 100789565 100798216 100776207 100250590 18096203 7460975 25489689 543744 102582879 107783616 107794571 4338177 9268829 103649996 103635708 542336 123180860 123112975 123077889 123443271 8078082 8054654 100844452 100822112 100845679 5718813
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