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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103845163   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 bna-r.1   111212944   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 bna-r.1   106401077   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ghi-r.1   121210544   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 cit-r.1   102624866   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 gma-u.5   100783405   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 vvi-u.5   100266493   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ppo-u.5   18107833   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 mtr-u.5   11444894   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sly-u.5   101244188   pentatricopeptide repeat-containing protein 
 sot-r.1   102585306   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 nta-r.1   107785341   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 nta-r.1   107832733   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 zma-u.5   103649988   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123069616   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123061028   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123078100   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 hvu-r.1   123443451   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sbi-r.1   8085827   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 bdi-r.1   100846389   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 

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Top 50 coexpressed genes to AT5G57250 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G57250 (ath-m.4.str coexpression data)

CoexMap"5008310"


athAT5G57250 | Entrez gene ID : 5008310      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi osa cre
Paralog 9 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001078759.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 3,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001078759.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001078759.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G57250
ath-u.5
for
AT5G57250
ath-r.7
for
AT5G57250
ath-m.9
for
AT5G57250
ath-e.2
for
AT5G57250
ath-m.4.bio
for
AT5G57250
ath-m.4.hor
for
AT5G57250
ath-m.4.lig
for
AT5G57250
ath-m.4.tis
for
AT5G57250
bra-r.6
for
103845163
bna-r.1
for
111212944
bna-r.1
for
106401077
ghi-r.1
for
121210544
cit-r.1
for
102624866
gma-u.5
for
100783405
vvi-u.5
for
100266493
ppo-u.5
for
18107833
mtr-u.5
for
11444894
sly-u.5
for
101244188
sot-r.1
for
102585306
nta-r.1
for
107785341
nta-r.1
for
107832733
zma-u.5
for
103649988
tae-r.2
for
123069616
tae-r.2
for
123061028
tae-r.2
for
123078100
hvu-r.1
for
123443451
sbi-r.1
for
8085827
bdi-r.1
for
100846389


Ortholog ID: 6447
Species ath bra bna bna ghi ghi ghi cit gma vvi ppo mtr sly sot nta nta zma tae tae tae hvu sbi bdi
Symbol AT5G57250 LOC103845163 LOC111212944 LOC106401077 LOC107962935 LOC107926292 LOC107916860 LOC102624866 LOC100783405 LOC100266493 LOC18107833 LOC11444894 LOC101244188 LOC102585306 LOC107785341 LOC107832733 LOC103649988 LOC123069616 LOC123061028 LOC123078100 LOC123443451 LOC8085827 LOC100846389
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008310 103845163 111212944 106401077 107962935 107926292 107916860 102624866 100783405 100266493 18107833 11444894 101244188 102585306 107785341 107832733 103649988 123069616 123061028 123078100 123443451 8085827 100846389
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