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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT2G43460   Ribosomal L38e protein family 
 ath-u.5   AT2G43460   Ribosomal L38e protein family 
 ath-r.7   AT2G43460   Ribosomal L38e protein family 
 ath-m.9   AT2G43460   Ribosomal L38e protein family 
 ath-e.2   AT2G43460   Ribosomal L38e protein family 
 ath-m.4.bio   AT2G43460   Ribosomal L38e protein family 
 ath-m.4.hor   AT2G43460   Ribosomal L38e protein family 
 ath-m.4.lig   AT2G43460   Ribosomal L38e protein family 
 ath-m.4.tis   AT2G43460   Ribosomal L38e protein family 
 ath-u.5   AT3G59540   Ribosomal L38e protein family 
 bra-r.6   103841797   60S ribosomal protein L38 
 bra-r.6   103866072   60S ribosomal protein L38 
 bra-r.6   103866717   60S ribosomal protein L38 
 bna-r.1   125608372   60S ribosomal protein L38-like 
 bna-r.1   106365037   60S ribosomal protein L38 
 bna-r.1   106368453   60S ribosomal protein L38 
 ghi-r.1   107915400   60S ribosomal protein L38 
 ghi-r.1   107923339   60S ribosomal protein L38 
 ghi-r.1   107927485   60S ribosomal protein L38 
 cit-r.1   102619410   60S ribosomal protein L38 
 cit-r.1   102610590   60S ribosomal protein L38 
 gma-u.5   100500171   60S ribosomal protein L38 
 gma-u.5   100806030   60S ribosomal protein L38 
 gma-u.5   100805669   60S ribosomal protein L38 
 vvi-u.5   100854038   large ribosomal subunit protein eL38z/eL38y 
 vvi-u.5   100268138   60S ribosomal protein L38 
 ppo-u.5   7491734   60S ribosomal protein L38 
 ppo-u.5   18106877   60S ribosomal protein L38 
 ppo-u.5   7474400   60S ribosomal protein L38 
 mtr-u.5   25501689   60S ribosomal protein L38 
 mtr-u.5   11442924   60S ribosomal protein L38 
 mtr-u.5   11427662   60S ribosomal protein L38 
 sly-u.5   101247384   large ribosomal subunit protein eL38 
 sly-u.5   rpl38   ribosomal protein L38 
 sot-r.1   102598237   60S ribosomal protein L38-like 
 sot-r.1   102598365   60S ribosomal protein L38 
 nta-r.1   107767504   large ribosomal subunit protein eL38 
 osa-u.5   4343529   large ribosomal subunit protein eL38z/eL38y 
 osa-u.5   4350406   large ribosomal subunit protein eL38z/eL38y 
 zma-u.5   100280770   60S ribosomal protein L38-like 
 zma-u.5   110485089   rpL38 
 zma-u.5   103643066   60S ribosomal protein L38-like 
 tae-r.2   123080887   60S ribosomal protein L38 
 tae-r.2   123188360   60S ribosomal protein L38 
 tae-r.2   123072702   60S ribosomal protein L38 
 hvu-r.1   123445617   60S ribosomal protein L38-like 
 hvu-r.1   123425778   60S ribosomal protein L38 
 sbi-r.1   8060905   60S ribosomal protein L38 
 sbi-r.1   8084094   60S ribosomal protein L38 
 bdi-r.1   100830442   60S ribosomal protein L38 
 bdi-r.1   100827860   60S ribosomal protein L38 
 cre-r.1   CHLRE_07g325746v5   ribosomal protein L38 

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Top 50 coexpressed genes to AT2G43460 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G43460 (ath-m.4.str coexpression data)

CoexMap"818947"


athAT2G43460 | Entrez gene ID : 818947      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 2 3 2 3 3 2 2 1 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_181874.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_181874.1)
Subcellular
localization
TargetP
other 8  (predict for NP_181874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT2G43460
ath-u.5
for
AT2G43460
ath-r.7
for
AT2G43460
ath-m.9
for
AT2G43460
ath-e.2
for
AT2G43460
ath-m.4.bio
for
AT2G43460
ath-m.4.hor
for
AT2G43460
ath-m.4.lig
for
AT2G43460
ath-m.4.tis
for
AT2G43460
ath-u.5
for
AT3G59540
bra-r.6
for
103841797
bra-r.6
for
103866072
bra-r.6
for
103866717
bna-r.1
for
125608372
bna-r.1
for
106365037
bna-r.1
for
106368453
ghi-r.1
for
107915400
ghi-r.1
for
107923339
ghi-r.1
for
107927485
cit-r.1
for
102619410
cit-r.1
for
102610590
gma-u.5
for
100500171
gma-u.5
for
100806030
gma-u.5
for
100805669
vvi-u.5
for
100854038
vvi-u.5
for
100268138
ppo-u.5
for
7491734
ppo-u.5
for
18106877
ppo-u.5
for
7474400
mtr-u.5
for
25501689
mtr-u.5
for
11442924
mtr-u.5
for
11427662
sly-u.5
for
101247384
sly-u.5
for
rpl38
sot-r.1
for
102598237
sot-r.1
for
102598365
nta-r.1
for
107767504
osa-u.5
for
4343529
osa-u.5
for
4350406
zma-u.5
for
100280770
zma-u.5
for
110485089
zma-u.5
for
103643066
tae-r.2
for
123080887
tae-r.2
for
123188360
tae-r.2
for
123072702
hvu-r.1
for
123445617
hvu-r.1
for
123425778
sbi-r.1
for
8060905
sbi-r.1
for
8084094
bdi-r.1
for
100830442
bdi-r.1
for
100827860
cre-r.1
for
CHLRE_07g325746v5


Ortholog ID: 1615
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT2G43460 AT3G59540 LOC103841797 LOC103866717 LOC103858070 LOC106450718 LOC111213354 LOC106356809 LOC107939716 LOC107896921 LOC107890551 LOC102619410 LOC102610590 LOC100805669 LOC100795924 LOC100305707 LOC100854038 LOC100268138 LOC7491734 LOC7474400 LOC7462113 LOC11442924 LOC11427662 LOC120577197 LOC101247384 rpl38 LOC102598237 LOC102598365 LOC107767504 LOC4343529 LOC4350406 LOC100280770 LOC110485089 LOC103643066 LOC123188360 LOC123066160 LOC123063571 LOC123445617 LOC123425778 LOC8060905 LOC8084094 LOC100830442 LOC100827860 CHLRE_07g325746v5
Function* Ribosomal L38e protein family Ribosomal L38e protein family 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 large ribosomal subunit protein eL38z/eL38y 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 large ribosomal subunit protein eL38 ribosomal protein L38 60S ribosomal protein L38-like 60S ribosomal protein L38 large ribosomal subunit protein eL38 large ribosomal subunit protein eL38z/eL38y large ribosomal subunit protein eL38z/eL38y 60S ribosomal protein L38-like rpL38 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 ribosomal protein L38
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03020 RNA polymerase 4
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818947 825123 103841797 103866717 103858070 106450718 111213354 106356809 107939716 107896921 107890551 102619410 102610590 100805669 100795924 100305707 100854038 100268138 7491734 7474400 7462113 11442924 11427662 120577197 101247384 544287 102598237 102598365 107767504 4343529 4350406 100280770 110485089 103643066 123188360 123066160 123063571 123445617 123425778 8060905 8084094 100830442 100827860 5728418
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