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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   LPP3   lipid phosphate phosphatase 3 
 ath-u.5   LPP3   lipid phosphate phosphatase 3 
 ath-r.7   LPP3   lipid phosphate phosphatase 3 
 ath-m.9   LPP3   lipid phosphate phosphatase 3 
 ath-e.2   LPP3   lipid phosphate phosphatase 3 
 ath-m.4.bio   LPP3   lipid phosphate phosphatase 3 
 ath-m.4.hor   LPP3   lipid phosphate phosphatase 3 
 ath-m.4.lig   LPP3   lipid phosphate phosphatase 3 
 ath-m.4.tis   LPP3   lipid phosphate phosphatase 3 
 ath-u.5   PAP1   phosphatidic acid phosphatase 1 
 ath-u.5   LPP2   lipid phosphate phosphatase 2 
 gma-u.5   100800585   putative lipid phosphate phosphatase 3, chloroplastic-like 
 gma-u.5   100785459   lipid phosphate phosphatase 2-like 
 vvi-u.5   100241275   putative lipid phosphate phosphatase 3, chloroplastic 
 vvi-u.5   100259291   lipid phosphate phosphatase 2 
 vvi-u.5   100254175   lipid phosphate phosphatase 2 
 ppo-u.5   18099446   putative lipid phosphate phosphatase 3, chloroplastic 
 ppo-u.5   7459816   putative lipid phosphate phosphatase 3, chloroplastic 
 ppo-u.5   7488376   putative lipid phosphate phosphatase 3, chloroplastic 
 mtr-u.5   11436764   lipid phosphate phosphatase 2 
 mtr-u.5   25485465   lipid phosphate phosphatase 2 
 sly-u.5   101267988   lipid phosphate phosphatase 2 
 sly-u.5   101260497   lipid phosphate phosphatase 2 
 sly-u.5   101257361   probable lipid phosphate phosphatase 4 
 osa-u.5   4326857   lipid phosphate phosphatase 2 
 osa-u.5   4345366   lipid phosphate phosphatase 2 
 zma-u.5   100280353   Lipid phosphate phosphatase 2 
 zma-u.5   100502288   Lipid phosphate phosphatase 2 
 zma-u.5   100273865   uncharacterized LOC100273865 

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Top 50 coexpressed genes to LPP3 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LPP3 (ath-m.4.str coexpression data)

CoexMap"821299"


athLPP3 | Entrez gene ID : 821299      
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 11 2 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00561 [list] [network] Glycerolipid metabolism (71 genes)
ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
GO BP
GO:0006644 [list] [network] phospholipid metabolic process  (119 genes)  ISS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0008195 [list] [network] phosphatidate phosphatase activity  (8 genes)  ISS  
Protein NP_001078095.1 [sequence] [blastp]
NP_001078096.1 [sequence] [blastp]
NP_001078097.1 [sequence] [blastp]
NP_001078098.1 [sequence] [blastp]
NP_001319453.1 [sequence] [blastp]
NP_001327797.1 [sequence] [blastp]
NP_001327798.1 [sequence] [blastp]
NP_001327799.1 [sequence] [blastp]
NP_001327800.1 [sequence] [blastp]
NP_001327801.1 [sequence] [blastp]
NP_001327802.1 [sequence] [blastp]
NP_566177.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 2,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for NP_001078095.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001078096.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001078097.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001078098.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001319453.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327797.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327798.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327799.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327800.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327801.1)
plas 6,  cyto_plas 4,  E.R. 1,  cyto 1,  E.R._vacu 1  (predict for NP_001327802.1)
plas 6,  E.R. 1,  golg 1,  mito 1,  vacu 1,  cyto_E.R. 1  (predict for NP_566177.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_001078095.1)
mito 9,  other 6  (predict for NP_001078096.1)
mito 9,  other 6  (predict for NP_001078097.1)
mito 9,  other 6  (predict for NP_001078098.1)
mito 9,  other 6  (predict for NP_001319453.1)
mito 9,  other 6  (predict for NP_001327797.1)
mito 9,  other 6  (predict for NP_001327798.1)
mito 9,  other 6  (predict for NP_001327799.1)
mito 9,  other 6  (predict for NP_001327800.1)
mito 9,  other 6  (predict for NP_001327801.1)
mito 9,  other 6  (predict for NP_001327802.1)
mito 3  (predict for NP_566177.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
LPP3

.
ath-u.5
for
LPP3

.
ath-r.7
for
LPP3

.
ath-m.9
for
LPP3

.
ath-e.2
for
LPP3

.
ath-m.4.bio
for
LPP3

.
ath-m.4.hor
for
LPP3

.
ath-m.4.lig
for
LPP3

.
ath-m.4.tis
for
LPP3

.
ath-u.5
for
PAP1

.
ath-u.5
for
LPP2

.
gma-u.5
for
100800585

.
gma-u.5
for
100785459

.
vvi-u.5
for
100241275

.
vvi-u.5
for
100259291

.
vvi-u.5
for
100254175

.
ppo-u.5
for
18099446

.
ppo-u.5
for
7459816

.
ppo-u.5
for
7488376

.
mtr-u.5
for
11436764

.
mtr-u.5
for
25485465

.
sly-u.5
for
101267988

.
sly-u.5
for
101260497

.
sly-u.5
for
101257361

.
osa-u.5
for
4326857

.
osa-u.5
for
4345366

.
zma-u.5
for
100280353

.
zma-u.5
for
100502288

.
zma-u.5
for
100273865

.


Ortholog ID: 553
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit cit bdi bdi nta
Symbol LPP3 PAP1 LOC100784929 LOC100805924 LOC101267988 LOC101268277 LOC4325649 LOC4345366 LOC100502288 LOC100280353 LOC103839503 LOC103858975 LOC100242178 LOC7488376 LOC7477450 LOC11440130 LOC123111680 LOC123449143 LOC107960069 LOC107960070 LOC106382859 LOC106365467 CHLRE_05g230900v5 LOC8083459 LOC102590836 LOC102610220 LOC102622378 LOC100839202 LOC100838994 LOC107813721
Function* lipid phosphate phosphatase 3 phosphatidic acid phosphatase 1 lipid phosphate phosphatase 1-like lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 Lipid phosphate phosphatase 2 Lipid phosphate phosphatase 2 lipid phosphate phosphatase 1 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2 uncharacterized protein lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2-like lipid phosphate phosphatase 2 putative lipid phosphate phosphatase 3, chloroplastic lipid phosphate phosphatase 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00260 Glycine, serine and threonine metabolism 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00561 Glycerolipid metabolism 2
sly00564 Glycerophospholipid metabolism 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00100 Steroid biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
vvi00564 Glycerophospholipid metabolism 2
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00410 beta-Alanine metabolism 2
sot00430 Taurine and hypotaurine metabolism 2
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821299 814646 100784929 100805924 101267988 101268277 4325649 4345366 100502288 100280353 103839503 103858975 100242178 7488376 7477450 11440130 123111680 123449143 107960069 107960070 106382859 106365467 5727801 8083459 102590836 102610220 102622378 100839202 100838994 107813721
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