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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-u.5   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-r.7   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-m.9   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-e.2   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.bio   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.hor   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.lig   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.tis   AT3G18190   TCP-1/cpn60 chaperonin family protein 
 bra-r.6   103838733   T-complex protein 1 subunit delta 
 bra-r.6   103869597   T-complex protein 1 subunit delta 
 bna-r.1   111198646   T-complex protein 1 subunit delta 
 bna-r.1   125604431   T-complex protein 1 subunit delta-like 
 bna-r.1   106436251   T-complex protein 1 subunit delta 
 ghi-r.1   107923517   T-complex protein 1 subunit delta 
 ghi-r.1   107904652   T-complex protein 1 subunit delta 
 ghi-r.1   107899056   T-complex protein 1 subunit delta 
 cit-r.1   102627807   T-complex protein 1 subunit delta 
 gma-u.5   100818827   T-complex protein 1 subunit delta 
 gma-u.5   CCT-D   cytosolic chaperonin 
 gma-u.5   100786888   T-complex protein 1 subunit delta 
 vvi-u.5   100262936   T-complex protein 1 subunit delta 
 ppo-u.5   7475660   T-complex protein 1 subunit delta 
 ppo-u.5   7486748   T-complex protein 1 subunit delta 
 mtr-u.5   25490054   T-complex protein 1 subunit delta 
 sly-u.5   101246121   T-complex protein 1 subunit delta 
 sot-r.1   102603797   T-complex protein 1 subunit delta 
 nta-r.1   107807204   T-complex protein 1 subunit delta 
 nta-r.1   107765406   T-complex protein 1 subunit delta 
 osa-u.5   4329211   T-complex protein 1 subunit delta 
 zma-u.5   100191456   uncharacterized LOC100191456 
 zma-u.5   100381530   putative TCP-1/cpn60 chaperonin family protein 
 tae-r.2   123148732   T-complex protein 1 subunit delta 
 tae-r.2   123164486   T-complex protein 1 subunit delta 
 tae-r.2   123156241   T-complex protein 1 subunit delta 
 hvu-r.1   123410971   T-complex protein 1 subunit delta-like 
 sbi-r.1   8077986   T-complex protein 1 subunit delta 
 bdi-r.1   100840540   T-complex protein 1 subunit delta 
 cre-r.1   CHLRE_05g234639v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G18190 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G18190 (ath-m.4.str coexpression data)

CoexMap"821346"


athAT3G18190 | Entrez gene ID : 821346    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_188447.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  pero 1,  nucl 1,  plas 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_188447.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_188447.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT3G18190
ath-u.5
for
AT3G18190
ath-r.7
for
AT3G18190
ath-m.9
for
AT3G18190
ath-e.2
for
AT3G18190
ath-m.4.bio
for
AT3G18190
ath-m.4.hor
for
AT3G18190
ath-m.4.lig
for
AT3G18190
ath-m.4.tis
for
AT3G18190
bra-r.6
for
103838733
bra-r.6
for
103869597
bna-r.1
for
111198646
bna-r.1
for
125604431
bna-r.1
for
106436251
ghi-r.1
for
107923517
ghi-r.1
for
107904652
ghi-r.1
for
107899056
cit-r.1
for
102627807
gma-u.5
for
100818827
gma-u.5
for
CCT-D
gma-u.5
for
100786888
vvi-u.5
for
100262936
ppo-u.5
for
7475660
ppo-u.5
for
7486748
mtr-u.5
for
25490054
sly-u.5
for
101246121
sot-r.1
for
102603797
nta-r.1
for
107807204
nta-r.1
for
107765406
osa-u.5
for
4329211
zma-u.5
for
100191456
zma-u.5
for
100381530
tae-r.2
for
123148732
tae-r.2
for
123164486
tae-r.2
for
123156241
hvu-r.1
for
123410971
sbi-r.1
for
8077986
bdi-r.1
for
100840540
cre-r.1
for
CHLRE_05g234639v5


Ortholog ID: 5751
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G18190 LOC103838733 LOC103869597 LOC125604431 LOC106436133 LOC106347154 LOC107923517 LOC107904652 LOC107890839 LOC102627807 LOC100818827 CCT-D LOC100786888 LOC100262936 LOC7475660 LOC7486748 LOC25490054 LOC101246121 LOC102603797 LOC107807204 LOC107765406 LOC4329211 LOC100191456 LOC100381530 LOC123148732 LOC123164486 LOC123156241 LOC123410971 LOC8077986 LOC100840540 CHLRE_05g234639v5
Function* TCP-1/cpn60 chaperonin family protein T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta-like T-complex protein 1 subunit delta T-complex protein 1 subunit delta-like T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta cytosolic chaperonin T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta uncharacterized LOC100191456 putative TCP-1/cpn60 chaperonin family protein T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta T-complex protein 1 subunit delta-like T-complex protein 1 subunit delta T-complex protein 1 subunit delta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 4
cit01210 2-Oxocarboxylic acid metabolism 3
cit00270 Cysteine and methionine metabolism 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03010 Ribosome 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03010 Ribosome 2
sot00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 3
tae04145 Phagosome 2
tae04517 IgSF CAM signaling 2
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 3
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821346 103838733 103869597 125604431 106436133 106347154 107923517 107904652 107890839 102627807 100818827 100127404 100786888 100262936 7475660 7486748 25490054 101246121 102603797 107807204 107765406 4329211 100191456 100381530 123148732 123164486 123156241 123410971 8077986 100840540 5726203
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