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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103837687   putative pentatricopeptide repeat-containing protein At3g47840 
 bra-r.6   103829603   putative pentatricopeptide repeat-containing protein At3g47840 
 bna-r.1   106358478   putative pentatricopeptide repeat-containing protein At3g47840 
 ghi-r.1   107913090   putative pentatricopeptide repeat-containing protein At3g47840 
 ghi-r.1   107901261   putative pentatricopeptide repeat-containing protein At3g47840 
 cit-r.1   102613409   putative pentatricopeptide repeat-containing protein At3g47840 
 gma-u.5   100817501   putative pentatricopeptide repeat-containing protein At3g47840 
 vvi-u.5   100247943   putative pentatricopeptide repeat-containing protein At3g47840 
 mtr-u.5   11414517   putative pentatricopeptide repeat-containing protein At3g47840 
 sly-u.5   101247291   putative pentatricopeptide repeat-containing protein At3g47840 
 sot-r.1   102594089   putative pentatricopeptide repeat-containing protein At3g47840 
 nta-r.1   107788375   putative pentatricopeptide repeat-containing protein At3g47840 
 nta-r.1   107814168   putative pentatricopeptide repeat-containing protein At3g47840 
 osa-u.5   4339725   putative pentatricopeptide repeat-containing protein At3g47840 
 zma-u.5   103635383   uncharacterized LOC103635383 
 hvu-r.1   123403472   putative pentatricopeptide repeat-containing protein At3g47840 
 sbi-r.1   8064732   putative pentatricopeptide repeat-containing protein At3g47840 
 bdi-r.1   100832943   putative pentatricopeptide repeat-containing protein At3g47840 
 bdi-r.1   100833873   putative pentatricopeptide repeat-containing protein At3g47840 

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Top 50 coexpressed genes to AT3G47840 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G47840 (ath-m.4.str coexpression data)

CoexMap"823940"


athAT3G47840 | Entrez gene ID : 823940      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi ppo cre tae
Paralog 6 2 1 2 1 1 1 1 1 1 2 1 1 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_190368.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  cyto 1  (predict for NP_190368.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_190368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT3G47840
ath-m.9
for
AT3G47840
ath-m.4.bio
for
AT3G47840
ath-m.4.hor
for
AT3G47840
ath-m.4.lig
for
AT3G47840
ath-m.4.tis
for
AT3G47840
bra-r.6
for
103837687
bra-r.6
for
103829603
bna-r.1
for
106358478
ghi-r.1
for
107913090
ghi-r.1
for
107901261
cit-r.1
for
102613409
gma-u.5
for
100817501
vvi-u.5
for
100247943
mtr-u.5
for
11414517
sly-u.5
for
101247291
sot-r.1
for
102594089
nta-r.1
for
107788375
nta-r.1
for
107814168
osa-u.5
for
4339725
zma-u.5
for
103635383
hvu-r.1
for
123403472
sbi-r.1
for
8064732
bdi-r.1
for
100832943
bdi-r.1
for
100833873


Ortholog ID: 10134
Species bra bra bna ghi ghi cit gma vvi mtr sly sot nta nta osa zma hvu sbi bdi bdi
Symbol LOC103837687 LOC103829603 LOC106358478 LOC107913090 LOC107901261 LOC102613409 LOC100817501 LOC100247943 LOC11414517 LOC101247291 LOC102594089 LOC107788375 LOC107814168 LOC4339725 LOC103635383 LOC123403472 LOC8064732 LOC100832943 LOC100833873
Function* putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 uncharacterized LOC103635383 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sbi00510 N-Glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103837687 103829603 106358478 107913090 107901261 102613409 100817501 100247943 11414517 101247291 102594089 107788375 107814168 4339725 103635383 123403472 8064732 100832943 100833873
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