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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT3G47840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100817501   putative pentatricopeptide repeat-containing protein At3g47840 
 vvi-u.5   100247943   putative pentatricopeptide repeat-containing protein At3g47840 
 mtr-u.5   11414517   putative pentatricopeptide repeat-containing protein At3g47840 
 sly-u.5   101247291   putative pentatricopeptide repeat-containing protein At3g47840 
 osa-u.5   4339725   putative pentatricopeptide repeat-containing protein At3g47840 
 zma-u.5   103635383   uncharacterized LOC103635383 

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Top 50 coexpressed genes to AT3G47840 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G47840 (ath-m.9 coexpression data)

CoexMap"823940"


athAT3G47840 | Entrez gene ID : 823940      
Species ath gma vvi mtr sly osa zma ppo hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 6 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_190368.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  cyto 1  (predict for NP_190368.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_190368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G47840

.
ath-m.4.bio
for
AT3G47840

.
ath-m.4.hor
for
AT3G47840

.
ath-m.4.lig
for
AT3G47840

.
ath-m.4.str
for
AT3G47840

.
ath-m.4.tis
for
AT3G47840

.
gma-u.5
for
100817501

.
vvi-u.5
for
100247943

.
mtr-u.5
for
11414517

.
sly-u.5
for
101247291

.
osa-u.5
for
4339725

.
zma-u.5
for
103635383

.


Ortholog ID: 10134
Species gma sly osa zma bra bra vvi mtr hvu ghi ghi sbi sot cit bdi bdi nta nta
Symbol LOC100817501 LOC101247291 LOC4339725 LOC103635383 LOC103829603 LOC103837687 LOC100247943 LOC11414517 LOC123403472 LOC107901261 LOC107913090 LOC8064732 LOC102594089 LOC102613409 LOC100833873 LOC100832943 LOC107814168 LOC107788375
Function* putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 uncharacterized LOC103635383 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840 putative pentatricopeptide repeat-containing protein At3g47840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sbi00510 N-Glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100817501 101247291 4339725 103635383 103829603 103837687 100247943 11414517 123403472 107901261 107913090 8064732 102594089 102613409 100833873 100832943 107814168 107788375
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