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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   CSY5   citrate synthase 5 
 ath-m.9   CSY5   citrate synthase 5 
 ath-m.4.bio   CSY5   citrate synthase 5 
 ath-m.4.hor   CSY5   citrate synthase 5 
 ath-m.4.lig   CSY5   citrate synthase 5 
 ath-m.4.tis   CSY5   citrate synthase 5 
 ath-u.5   ATCS   Citrate synthase family protein 
 bra-r.6   103866133   citrate synthase 4, mitochondrial 
 bra-r.6   103858130   citrate synthase 4, mitochondrial 
 bna-r.1   111215193   citrate synthase 4, mitochondrial-like 
 bna-r.1   111202035   citrate synthase 5, mitochondrial-like 
 bna-r.1   106449102   citrate synthase 5, mitochondrial 
 ghi-r.1   107905799   citrate synthase, mitochondrial 
 ghi-r.1   107913953   citrate synthase, mitochondrial 
 cit-r.1   102577950   citrate synthase 
 gma-u.5   100781418   citrate synthase, mitochondrial 
 gma-u.5   100499624   citrate synthase 
 vvi-u.5   100261432   citrate synthase, mitochondrial 
 ppo-u.5   18094999   citrate synthase, mitochondrial 
 mtr-u.5   25486862   citrate synthase, mitochondrial 
 sly-u.5   101249011   citrate synthase, mitochondrial 
 sot-r.1   102595372   citrate synthase, mitochondrial 
 nta-r.1   107791757   citrate synthase, mitochondrial 
 nta-r.1   107779254   citrate synthase, mitochondrial-like 
 osa-u.5   4350660   citrate synthase 4, mitochondrial 
 osa-u.5   4328598   citrate synthase 4, mitochondrial 
 zma-u.5   100194338   uncharacterized LOC100194338 
 zma-u.5   100279573   uncharacterized LOC100279573 
 zma-u.5   100280203   uncharacterized LOC100280203 
 tae-r.2   123144240   citrate synthase 4, mitochondrial 
 tae-r.2   123136754   citrate synthase 4, mitochondrial 
 tae-r.2   123132662   citrate synthase 4, mitochondrial 
 hvu-r.1   123401217   citrate synthase 4, mitochondrial-like 
 sbi-r.1   8071625   citrate synthase 4, mitochondrial 
 bdi-r.1   100821411   citrate synthase 4, mitochondrial 
 cre-r.1   CHLRE_12g514750v5   uncharacterized protein 

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Top 50 coexpressed genes to CSY5 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CSY5 (ath-m.4.str coexpression data)

CoexMap"825180"


athCSY5 | Entrez gene ID : 825180      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 7 2 3 2 1 2 1 1 1 1 1 2 2 3 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (81 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (103 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA ISM  
GO MF
Protein NP_001327512.1 [sequence] [blastp]
NP_001327513.1 [sequence] [blastp]
NP_191569.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 2  (predict for NP_001327512.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_001327513.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_191569.2)
Subcellular
localization
TargetP
mito 7  (predict for NP_001327512.1)
mito 7  (predict for NP_001327513.1)
mito 7  (predict for NP_191569.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
CSY5
ath-m.9
for
CSY5
ath-m.4.bio
for
CSY5
ath-m.4.hor
for
CSY5
ath-m.4.lig
for
CSY5
ath-m.4.tis
for
CSY5
ath-u.5
for
ATCS
bra-r.6
for
103866133
bra-r.6
for
103858130
bna-r.1
for
111215193
bna-r.1
for
111202035
bna-r.1
for
106449102
ghi-r.1
for
107905799
ghi-r.1
for
107913953
cit-r.1
for
102577950
gma-u.5
for
100781418
gma-u.5
for
100499624
vvi-u.5
for
100261432
ppo-u.5
for
18094999
mtr-u.5
for
25486862
sly-u.5
for
101249011
sot-r.1
for
102595372
nta-r.1
for
107791757
nta-r.1
for
107779254
osa-u.5
for
4350660
osa-u.5
for
4328598
zma-u.5
for
100194338
zma-u.5
for
100279573
zma-u.5
for
100280203
tae-r.2
for
123144240
tae-r.2
for
123136754
tae-r.2
for
123132662
hvu-r.1
for
123401217
sbi-r.1
for
8071625
bdi-r.1
for
100821411
cre-r.1
for
CHLRE_12g514750v5


Ortholog ID: 5977
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol ATCS LOC103866133 LOC103858130 LOC111215193 LOC106429286 LOC106438218 LOC107905799 LOC107913953 LOC102577950 LOC100781418 LOC100499624 LOC100261432 LOC18094999 LOC25486862 LOC101249011 LOC102595372 LOC107791757 LOC107779254 LOC4350660 LOC4328598 LOC100194338 LOC100279573 LOC100280203 LOC123144240 LOC123136754 LOC123132662 LOC123401217 LOC8071625 LOC100821411 CHLRE_12g514750v5
Function* Citrate synthase family protein citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial-like citrate synthase 4, mitochondrial-like citrate synthase 4, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase citrate synthase, mitochondrial citrate synthase citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial citrate synthase, mitochondrial-like citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial uncharacterized LOC100194338 uncharacterized LOC100279573 uncharacterized LOC100280203 citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial-like citrate synthase 4, mitochondrial citrate synthase 4, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 14
ath00020 Citrate cycle (TCA cycle) 11
ath01210 2-Oxocarboxylic acid metabolism 11
ath00010 Glycolysis / Gluconeogenesis 7
ath00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra01200 Carbon metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00710 Carbon fixation by Calvin cycle 3
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna01200 Carbon metabolism 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna01200 Carbon metabolism 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna01200 Carbon metabolism 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 15
ghi01200 Carbon metabolism 9
ghi01210 2-Oxocarboxylic acid metabolism 8
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 15
ghi01200 Carbon metabolism 9
ghi01210 2-Oxocarboxylic acid metabolism 8
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit03008 Ribosome biogenesis in eukaryotes 8
cit00190 Oxidative phosphorylation 3
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 5
gma01200 Carbon metabolism 5
gma01210 2-Oxocarboxylic acid metabolism 5
gma00190 Oxidative phosphorylation 4
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 10
gma01200 Carbon metabolism 10
gma01210 2-Oxocarboxylic acid metabolism 10
gma01230 Biosynthesis of amino acids 6
gma00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 9
vvi00020 Citrate cycle (TCA cycle) 7
vvi01210 2-Oxocarboxylic acid metabolism 6
vvi01230 Biosynthesis of amino acids 5
vvi00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00020 Citrate cycle (TCA cycle) 7
ppo01210 2-Oxocarboxylic acid metabolism 7
ppo04141 Protein processing in endoplasmic reticulum 6
ppo00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 11
mtr00020 Citrate cycle (TCA cycle) 9
mtr01210 2-Oxocarboxylic acid metabolism 7
mtr00190 Oxidative phosphorylation 5
mtr00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 11
sly00020 Citrate cycle (TCA cycle) 10
sly01210 2-Oxocarboxylic acid metabolism 7
sly00785 Lipoic acid metabolism 5
sly01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 11
sot00020 Citrate cycle (TCA cycle) 10
sot01210 2-Oxocarboxylic acid metabolism 8
sot00785 Lipoic acid metabolism 5
sot01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 11
nta00010 Glycolysis / Gluconeogenesis 8
nta00620 Pyruvate metabolism 8
nta00020 Citrate cycle (TCA cycle) 6
nta01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 10
nta00020 Citrate cycle (TCA cycle) 7
nta01210 2-Oxocarboxylic acid metabolism 6
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 9
osa00190 Oxidative phosphorylation 7
osa01210 2-Oxocarboxylic acid metabolism 5
osa00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 10
osa00020 Citrate cycle (TCA cycle) 9
osa01210 2-Oxocarboxylic acid metabolism 8
osa00010 Glycolysis / Gluconeogenesis 5
osa00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 11
zma00020 Citrate cycle (TCA cycle) 10
zma01210 2-Oxocarboxylic acid metabolism 10
zma01230 Biosynthesis of amino acids 6
zma00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 11
zma00020 Citrate cycle (TCA cycle) 10
zma01210 2-Oxocarboxylic acid metabolism 10
zma01230 Biosynthesis of amino acids 6
zma00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 4
zma00030 Pentose phosphate pathway 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 14
tae01200 Carbon metabolism 14
tae01210 2-Oxocarboxylic acid metabolism 14
tae00785 Lipoic acid metabolism 8
tae00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 14
tae01200 Carbon metabolism 14
tae01210 2-Oxocarboxylic acid metabolism 14
tae00785 Lipoic acid metabolism 8
tae00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 15
tae00020 Citrate cycle (TCA cycle) 14
tae01210 2-Oxocarboxylic acid metabolism 14
tae00785 Lipoic acid metabolism 8
tae00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 12
hvu00020 Citrate cycle (TCA cycle) 8
hvu01210 2-Oxocarboxylic acid metabolism 7
hvu01230 Biosynthesis of amino acids 6
hvu00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 7
sbi01200 Carbon metabolism 7
sbi01210 2-Oxocarboxylic acid metabolism 5
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 11
bdi00020 Citrate cycle (TCA cycle) 7
bdi01210 2-Oxocarboxylic acid metabolism 6
bdi00620 Pyruvate metabolism 6
bdi01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre01210 2-Oxocarboxylic acid metabolism 5
cre00220 Arginine biosynthesis 4
cre00190 Oxidative phosphorylation 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819042 103866133 103858130 111215193 106429286 106438218 107905799 107913953 102577950 100781418 100499624 100261432 18094999 25486862 101249011 102595372 107791757 107779254 4350660 4328598 100194338 100279573 100280203 123144240 123136754 123132662 123401217 8071625 100821411 5728523
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