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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-r.7   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.9   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-e.2   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   AT5G08560   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT5G43920   transducin family protein / WD-40 repeat family protein 
 bra-r.6   103855800   WD repeat-containing protein 26 homolog 
 bra-r.6   103839218   WD repeat-containing protein WDS homolog 
 bna-r.1   111204262   WD repeat-containing protein 26 homolog 
 bna-r.1   111197776   WD repeat-containing protein 26 homolog 
 ghi-r.1   107940994   WD repeat-containing protein 26 homolog 
 ghi-r.1   107926409   WD repeat-containing protein 26 homolog 
 ghi-r.1   107929818   WD repeat-containing protein 26 homolog 
 cit-r.1   102624907   WD repeat-containing protein 26 homolog 
 cit-r.1   102631471   WD repeat-containing protein WDS homolog 
 cit-r.1   102613121   WD repeat-containing protein 26 homolog 
 gma-u.5   100802844   WD repeat-containing protein 26 homolog 
 gma-u.5   100813925   WD repeat-containing protein 26 homolog 
 gma-u.5   100818922   WD repeat-containing protein WDS homolog 
 vvi-u.5   100266218   WD repeat-containing protein 26 homolog 
 vvi-u.5   100264261   WD repeat-containing protein 26 homolog 
 vvi-u.5   100251541   WD repeat-containing protein WDS homolog 
 ppo-u.5   7454305   WD repeat-containing protein 26 homolog 
 ppo-u.5   7464414   WD repeat-containing protein WDS homolog 
 ppo-u.5   7464664   WD repeat-containing protein 26 homolog 
 mtr-u.5   11426741   WD repeat-containing protein 26 homolog 
 mtr-u.5   25484185   WD repeat-containing protein WDS homolog 
 mtr-u.5   25490562   WD repeat-containing protein 26 homolog 
 sly-u.5   101248217   WD repeat-containing protein 26 homolog 
 sly-u.5   101258261   WD repeat-containing protein 26 homolog 
 sly-u.5   101267507   WD repeat-containing protein 26 homolog 
 sot-r.1   102605993   WD repeat-containing protein 26-like 
 sot-r.1   102604387   WD repeat-containing protein 26-like 
 sot-r.1   102600596   WD repeat-containing protein 26-like 
 nta-r.1   107806490   WD repeat-containing protein 26 homolog 
 nta-r.1   107807096   WD repeat-containing protein 26 homolog 
 nta-r.1   107827204   WD repeat-containing protein 26 homolog 
 osa-u.5   4348836   WD repeat-containing protein WDS homolog 
 osa-u.5   9266581   WD repeat-containing protein 26 homolog 
 zma-u.5   103643484   WD repeat-containing protein WDS homolog 
 zma-u.5   100304385   leunig-related8 
 zma-u.5   100194293   leunig-related7 
 tae-r.2   123180978   WD repeat-containing protein WDS homolog 
 tae-r.2   123110624   WD repeat-containing protein 26 homolog 
 tae-r.2   123156287   WD repeat-containing protein 26 homolog 
 hvu-r.1   123430424   WD repeat-containing protein WDS homolog 
 hvu-r.1   123407382   WD repeat-containing protein 26 homolog 
 hvu-r.1   123400098   WD repeat-containing protein 26 homolog 
 sbi-r.1   110436952   WD repeat-containing protein 26 
 sbi-r.1   8059263   WD repeat-containing protein 26 
 bdi-r.1   100830778   WD repeat-containing protein 26 homolog 
 bdi-r.1   100828210   WD repeat-containing protein WDS homolog 
 cre-r.1   CHLRE_08g382515v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G08560 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G08560 (ath-m.4.str coexpression data)

CoexMap"830756"


athAT5G08560 | Entrez gene ID : 830756      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 2 3 3 3 3 3 3 3 3 3 2 3 3 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009646 [list] [network] response to absence of light  (58 genes)  IDA  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IDA  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078546.1 [sequence] [blastp]
NP_001318513.1 [sequence] [blastp]
NP_196473.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001078546.1)
nucl 9,  cyto 1  (predict for NP_001318513.1)
nucl 9,  cyto 1  (predict for NP_196473.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001078546.1)
other 5,  chlo 4  (predict for NP_001318513.1)
other 5,  chlo 4  (predict for NP_196473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G08560
ath-u.5
for
AT5G08560
ath-r.7
for
AT5G08560
ath-m.9
for
AT5G08560
ath-e.2
for
AT5G08560
ath-m.4.bio
for
AT5G08560
ath-m.4.hor
for
AT5G08560
ath-m.4.lig
for
AT5G08560
ath-m.4.tis
for
AT5G08560
ath-u.5
for
AT5G43920
bra-r.6
for
103855800
bra-r.6
for
103839218
bna-r.1
for
111204262
bna-r.1
for
111197776
ghi-r.1
for
107940994
ghi-r.1
for
107926409
ghi-r.1
for
107929818
cit-r.1
for
102624907
cit-r.1
for
102631471
cit-r.1
for
102613121
gma-u.5
for
100802844
gma-u.5
for
100813925
gma-u.5
for
100818922
vvi-u.5
for
100266218
vvi-u.5
for
100264261
vvi-u.5
for
100251541
ppo-u.5
for
7454305
ppo-u.5
for
7464414
ppo-u.5
for
7464664
mtr-u.5
for
11426741
mtr-u.5
for
25484185
mtr-u.5
for
25490562
sly-u.5
for
101248217
sly-u.5
for
101258261
sly-u.5
for
101267507
sot-r.1
for
102605993
sot-r.1
for
102604387
sot-r.1
for
102600596
nta-r.1
for
107806490
nta-r.1
for
107807096
nta-r.1
for
107827204
osa-u.5
for
4348836
osa-u.5
for
9266581
zma-u.5
for
103643484
zma-u.5
for
100304385
zma-u.5
for
100194293
tae-r.2
for
123180978
tae-r.2
for
123110624
tae-r.2
for
123156287
hvu-r.1
for
123430424
hvu-r.1
for
123407382
hvu-r.1
for
123400098
sbi-r.1
for
110436952
sbi-r.1
for
8059263
bdi-r.1
for
100830778
bdi-r.1
for
100828210
cre-r.1
for
CHLRE_08g382515v5


Ortholog ID: 1400
Species ath ath bra bra bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol AT5G08560 AT5G43920 LOC103855800 LOC103847170 LOC106383676 LOC106384958 LOC107940994 LOC107942160 LOC107888468 LOC102624907 LOC102631471 LOC102613121 LOC100802844 LOC100813925 LOC100780502 LOC100266218 LOC100264261 LOC100251541 LOC7454305 LOC7468716 LOC25484185 LOC25490562 LOC25490564 LOC101258261 LOC101267507 LOC102604387 LOC102600596 LOC102590228 LOC107806490 LOC107827204 LOC107785784 LOC4348836 LOC9266581 LOC103643484 LOC100304385 LOC100194293 LOC123156287 LOC123119648 LOC123120188 LOC123430424 LOC123407382 LOC123400098 LOC110436952 LOC8059263 LOC100830778 LOC100828210 CHLRE_08g382515v5
Function* transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat family protein WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26-like WD repeat-containing protein 26-like WD repeat-containing protein 26 WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog leunig-related8 leunig-related7 WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog WD repeat-containing protein WDS homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 homolog WD repeat-containing protein 26 WD repeat-containing protein 26 WD repeat-containing protein 26 homolog WD repeat-containing protein WDS homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
cit04145 Phagosome 2
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma00071 Fatty acid degradation 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 5
nta03420 Nucleotide excision repair 5
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00561 Glycerolipid metabolism 2
hvu00564 Glycerophospholipid metabolism 2
hvu00565 Ether lipid metabolism 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04136 Autophagy - other 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04070 Phosphatidylinositol signaling system 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830756 834414 103855800 103847170 106383676 106384958 107940994 107942160 107888468 102624907 102631471 102613121 100802844 100813925 100780502 100266218 100264261 100251541 7454305 7468716 25484185 25490562 25490564 101258261 101267507 102604387 102600596 102590228 107806490 107827204 107785784 4348836 9266581 103643484 100304385 100194293 123156287 123119648 123120188 123430424 123407382 123400098 110436952 8059263 100830778 100828210 5719838
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