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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G47920   transcription elongation factor 
 ath-u.5   AT5G47920   transcription elongation factor 
 ath-r.7   AT5G47920   transcription elongation factor 
 ath-m.9   AT5G47920   transcription elongation factor 
 ath-e.2   AT5G47920   transcription elongation factor 
 ath-m.4.bio   AT5G47920   transcription elongation factor 
 ath-m.4.hor   AT5G47920   transcription elongation factor 
 ath-m.4.lig   AT5G47920   transcription elongation factor 
 ath-m.4.tis   AT5G47920   transcription elongation factor 
 ath-u.5   AT5G13880   cotton fiber protein 
 bra-r.6   103846532   uncharacterized LOC103846532 
 bra-r.6   103837235   uncharacterized LOC103837235 
 bra-r.6   103854510   uncharacterized LOC103854510 
 bna-r.1   BNAC07G49270D   uncharacterized BNAC07G49270D 
 bna-r.1   BNAC02G38310D   uncharacterized BNAC02G38310D 
 ghi-r.1   107946211   uncharacterized LOC107946211 
 ghi-r.1   121210955   uncharacterized LOC121210955 
 ghi-r.1   107949752   uncharacterized LOC107949752 
 cit-r.1   102612020   uncharacterized LOC102612020 
 cit-r.1   102624355   hypothetical protein 
 gma-u.5   100807332   uncharacterized LOC100807332 
 gma-u.5   100781263   uncharacterized LOC100781263 
 gma-u.5   100780939   uncharacterized LOC100780939 
 vvi-u.5   100253147   uncharacterized LOC100253147 
 vvi-u.5   100267772   uncharacterized LOC100267772 
 ppo-u.5   7457997   uncharacterized LOC7457997 
 mtr-u.5   11431449   uncharacterized LOC11431449 
 mtr-u.5   11435740   uncharacterized LOC11435740 
 sly-u.5   101252722   uncharacterized LOC101252722 
 sot-r.1   102593407   uncharacterized LOC102593407 
 nta-r.1   107769451   uncharacterized LOC107769451 
 osa-u.5   4329435   uncharacterized LOC4329435 
 osa-u.5   4335641   uncharacterized LOC4335641 
 zma-u.5   100276179   uncharacterized LOC100276179 
 tae-r.2   123045292   uncharacterized LOC123045292 
 tae-r.2   123154753   uncharacterized LOC123154753 
 tae-r.2   123185423   uncharacterized LOC123185423 
 hvu-r.1   123430198   uncharacterized LOC123430198 
 sbi-r.1   8070785   uncharacterized LOC8070785 
 bdi-r.1   100835173   uncharacterized LOC100835173 
 bdi-r.1   100826669   uncharacterized LOC100826669 

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Top 50 coexpressed genes to AT5G47920 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47920 (ath-m.4.str coexpression data)

CoexMap"834843"


athAT5G47920 | Entrez gene ID : 834843      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 2 3 2 3 2 1 2 1 1 1 2 1 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_199603.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for NP_199603.1)
Subcellular
localization
TargetP
scret 4  (predict for NP_199603.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G47920
ath-u.5
for
AT5G47920
ath-r.7
for
AT5G47920
ath-m.9
for
AT5G47920
ath-e.2
for
AT5G47920
ath-m.4.bio
for
AT5G47920
ath-m.4.hor
for
AT5G47920
ath-m.4.lig
for
AT5G47920
ath-m.4.tis
for
AT5G47920
ath-u.5
for
AT5G13880
bra-r.6
for
103846532
bra-r.6
for
103837235
bra-r.6
for
103854510
bna-r.1
for
BNAC07G49270D
bna-r.1
for
BNAC02G38310D
ghi-r.1
for
107946211
ghi-r.1
for
121210955
ghi-r.1
for
107949752
cit-r.1
for
102612020
cit-r.1
for
102624355
gma-u.5
for
100807332
gma-u.5
for
100781263
gma-u.5
for
100780939
vvi-u.5
for
100253147
vvi-u.5
for
100267772
ppo-u.5
for
7457997
mtr-u.5
for
11431449
mtr-u.5
for
11435740
sly-u.5
for
101252722
sot-r.1
for
102593407
nta-r.1
for
107769451
osa-u.5
for
4329435
osa-u.5
for
4335641
zma-u.5
for
100276179
tae-r.2
for
123045292
tae-r.2
for
123154753
tae-r.2
for
123185423
hvu-r.1
for
123430198
sbi-r.1
for
8070785
bdi-r.1
for
100835173
bdi-r.1
for
100826669


Ortholog ID: 3380
Species ath ath bra bra bra bna bna bna ghi ghi cit cit gma gma gma vvi vvi ppo mtr mtr sly sot nta osa osa zma tae tae tae hvu sbi bdi bdi
Symbol AT5G47920 AT5G13880 LOC103846532 LOC103837235 LOC103874918 BNAC02G38310D LOC111208242 LOC106370594 LOC121210955 LOC107888146 LOC102612020 LOC102624355 LOC100807332 LOC100781263 LOC100780939 LOC100253147 LOC100267772 LOC7457997 LOC11431449 LOC11435740 LOC101252722 LOC102593407 LOC107769451 LOC4329435 LOC4335641 LOC100276179 LOC123154753 LOC123185423 LOC123159108 LOC123430198 LOC8070785 LOC100835173 LOC100826669
Function* transcription elongation factor cotton fiber protein uncharacterized LOC103846532 uncharacterized LOC103837235 uncharacterized LOC103874918 uncharacterized BNAC02G38310D uncharacterized LOC111208242 uncharacterized LOC106370594 uncharacterized LOC121210955 uncharacterized LOC107888146 uncharacterized LOC102612020 hypothetical protein uncharacterized LOC100807332 uncharacterized LOC100781263 uncharacterized LOC100780939 uncharacterized LOC100253147 uncharacterized LOC100267772 uncharacterized LOC7457997 uncharacterized LOC11431449 uncharacterized LOC11435740 uncharacterized LOC101252722 uncharacterized LOC102593407 uncharacterized LOC107769451 uncharacterized LOC4329435 uncharacterized LOC4335641 uncharacterized LOC100276179 uncharacterized LOC123154753 uncharacterized LOC123185423 uncharacterized LOC123159108 uncharacterized LOC123430198 uncharacterized LOC8070785 uncharacterized LOC100835173 uncharacterized LOC100826669
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 8
sbi03060 Protein export 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834843 831235 103846532 103837235 103874918 106429002 111208242 106370594 121210955 107888146 102612020 102624355 100807332 100781263 100780939 100253147 100267772 7457997 11431449 11435740 101252722 102593407 107769451 4329435 4335641 100276179 123154753 123185423 123159108 123430198 8070785 100835173 100826669
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