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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-u.5   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-r.7   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-m.9   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-e.2   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-m.4.bio   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-m.4.hor   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-m.4.lig   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 ath-m.4.tis   AT5G58510   Rab3 GTPase-activating protein catalytic protein 
 bra-r.6   103845281   rab3 GTPase-activating protein catalytic subunit 
 bra-r.6   103856685   rab3 GTPase-activating protein catalytic subunit 
 bna-r.1   106376293   rab3 GTPase-activating protein catalytic subunit-like 
 bna-r.1   106387151   rab3 GTPase-activating protein catalytic subunit-like 
 bna-r.1   106435849   rab3 GTPase-activating protein catalytic subunit 
 ghi-r.1   107927128   rab3 GTPase-activating protein catalytic subunit 
 ghi-r.1   107963850   rab3 GTPase-activating protein catalytic subunit 
 ghi-r.1   107957665   rab3 GTPase-activating protein catalytic subunit 
 cit-r.1   102610637   uncharacterized LOC102610637 
 gma-u.5   100819637   rab3 GTPase-activating protein catalytic subunit 
 gma-u.5   100810877   rab3 GTPase-activating protein catalytic subunit 
 vvi-u.5   100260479   uncharacterized LOC100260479 
 ppo-u.5   7454840   uncharacterized LOC7454840 
 mtr-u.5   25490984   rab3 GTPase-activating protein catalytic subunit 
 sly-u.5   101252600   uncharacterized LOC101252600 
 sot-r.1   102595663   rab3 GTPase-activating protein catalytic subunit 
 nta-r.1   107824993   uncharacterized LOC107824993 
 nta-r.1   107810369   uncharacterized LOC107810369 
 nta-r.1   107775079   uncharacterized LOC107775079 
 osa-u.5   4332534   uncharacterized LOC4332534 
 zma-u.5   103639262   rab3 GTPase-activating protein catalytic subunit 
 tae-r.2   123085597   rab3 GTPase-activating protein catalytic subunit 
 tae-r.2   123097755   rab3 GTPase-activating protein catalytic subunit 
 tae-r.2   123092432   rab3 GTPase-activating protein catalytic subunit 
 hvu-r.1   123448888   rab3 GTPase-activating protein catalytic subunit 
 sbi-r.1   8084027   rab3 GTPase-activating protein catalytic subunit 
 bdi-r.1   100825139   rab3 GTPase-activating protein catalytic subunit 
 cre-r.1   CHLRE_04g228000v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G58510 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G58510 (ath-m.4.str coexpression data)

CoexMap"835964"


athAT5G58510 | Entrez gene ID : 835964      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001332207.1 [sequence] [blastp]
NP_200659.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for NP_001332207.1)
nucl 9,  cyto 1,  vacu 1  (predict for NP_200659.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001332207.1)
other 8  (predict for NP_200659.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G58510
ath-u.5
for
AT5G58510
ath-r.7
for
AT5G58510
ath-m.9
for
AT5G58510
ath-e.2
for
AT5G58510
ath-m.4.bio
for
AT5G58510
ath-m.4.hor
for
AT5G58510
ath-m.4.lig
for
AT5G58510
ath-m.4.tis
for
AT5G58510
bra-r.6
for
103845281
bra-r.6
for
103856685
bna-r.1
for
106376293
bna-r.1
for
106387151
bna-r.1
for
106435849
ghi-r.1
for
107927128
ghi-r.1
for
107963850
ghi-r.1
for
107957665
cit-r.1
for
102610637
gma-u.5
for
100819637
gma-u.5
for
100810877
vvi-u.5
for
100260479
ppo-u.5
for
7454840
mtr-u.5
for
25490984
sly-u.5
for
101252600
sot-r.1
for
102595663
nta-r.1
for
107824993
nta-r.1
for
107810369
nta-r.1
for
107775079
osa-u.5
for
4332534
zma-u.5
for
103639262
tae-r.2
for
123085597
tae-r.2
for
123097755
tae-r.2
for
123092432
hvu-r.1
for
123448888
sbi-r.1
for
8084027
bdi-r.1
for
100825139
cre-r.1
for
CHLRE_04g228000v5


Ortholog ID: 7384
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G58510 LOC103845281 LOC103856685 LOC106376293 LOC106435849 LOC106420533 LOC107927128 LOC107957665 LOC107936053 LOC102610637 LOC100819637 LOC100810877 LOC100260479 LOC7454840 LOC25490984 LOC101252600 LOC102595663 LOC107824993 LOC107810369 LOC107775079 LOC4332534 LOC103639262 LOC123085597 LOC123097755 LOC123092432 LOC123448888 LOC8084027 LOC100825139 CHLRE_04g228000v5
Function* Rab3 GTPase-activating protein catalytic protein rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit-like rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit-like rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit uncharacterized LOC102610637 rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit uncharacterized LOC100260479 uncharacterized LOC7454840 rab3 GTPase-activating protein catalytic subunit uncharacterized LOC101252600 rab3 GTPase-activating protein catalytic subunit uncharacterized LOC107824993 uncharacterized LOC107810369 uncharacterized LOC107775079 uncharacterized LOC4332534 rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit rab3 GTPase-activating protein catalytic subunit uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 2
bra01310 Nitrogen cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03022 Basal transcription factors 3
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
sbi03083 Polycomb repressive complex 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835964 103845281 103856685 106376293 106435849 106420533 107927128 107957665 107936053 102610637 100819637 100810877 100260479 7454840 25490984 101252600 102595663 107824993 107810369 107775079 4332534 103639262 123085597 123097755 123092432 123448888 8084027 100825139 66053294
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