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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   PER4   Peroxidase superfamily protein 
 ath-u.5   PER4   Peroxidase superfamily protein 
 ath-r.7   PER4   Peroxidase superfamily protein 
 ath-m.9   PER4   Peroxidase superfamily protein 
 ath-e.2   PER4   Peroxidase superfamily protein 
 ath-m.4.bio   PER4   Peroxidase superfamily protein 
 ath-m.4.hor   PER4   Peroxidase superfamily protein 
 ath-m.4.lig   PER4   Peroxidase superfamily protein 
 ath-m.4.tis   PER4   Peroxidase superfamily protein 
 ath-u.5   AT1G14550   Peroxidase superfamily protein 
 bra-r.6   103872253   peroxidase 4 
 bra-r.6   103842960   peroxidase 4-like 
 bna-r.1   111198839   peroxidase 4-like 
 bna-r.1   111213093   peroxidase 4-like 
 bna-r.1   106402051   peroxidase 4 
 ghi-r.1   107952179   lignin-forming anionic peroxidase 
 ghi-r.1   107945916   lignin-forming anionic peroxidase 
 ghi-r.1   107921848   lignin-forming anionic peroxidase 
 gma-u.5   100786161   lignin-forming anionic peroxidase 
 vvi-u.5   100259700   lignin-forming anionic peroxidase 
 mtr-u.5   25492840   lignin-forming anionic peroxidase 
 mtr-u.5   11444576   lignin-forming anionic peroxidase 
 sly-u.5   112940337   lignin-forming anionic peroxidase-like 
 sot-r.1   102599501   lignin-forming anionic peroxidase 
 sot-r.1   102591445   lignin-forming anionic peroxidase-like 
 sot-r.1   102597272   lignin-forming anionic peroxidase-like 
 nta-r.1   142177484   lignin-forming anionic peroxidase-like 
 nta-r.1   142177463   lignin-forming anionic peroxidase-like 

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Top 50 coexpressed genes to PER4 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PER4 (ath-m.4.str coexpression data)

CoexMap"838016"


athPER4 | Entrez gene ID : 838016      
Species ath bra bna ghi gma vvi mtr sly sot nta tae zma bdi osa ppo cit sbi hvu cre
Paralog 10 2 3 3 1 1 2 1 3 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00940 [list] [network] Phenylpropanoid biosynthesis (127 genes)
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0004601 [list] [network] peroxidase activity  (47 genes)  IDA  
Protein NP_172906.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 3,  extr 1,  E.R. 1,  golg 1  (predict for NP_172906.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_172906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
PER4
ath-u.5
for
PER4
ath-r.7
for
PER4
ath-m.9
for
PER4
ath-e.2
for
PER4
ath-m.4.bio
for
PER4
ath-m.4.hor
for
PER4
ath-m.4.lig
for
PER4
ath-m.4.tis
for
PER4
ath-u.5
for
AT1G14550
bra-r.6
for
103872253
bra-r.6
for
103842960
bna-r.1
for
111198839
bna-r.1
for
111213093
bna-r.1
for
106402051
ghi-r.1
for
107952179
ghi-r.1
for
107945916
ghi-r.1
for
107921848
gma-u.5
for
100786161
vvi-u.5
for
100259700
mtr-u.5
for
25492840
mtr-u.5
for
11444576
sly-u.5
for
112940337
sot-r.1
for
102599501
sot-r.1
for
102591445
sot-r.1
for
102597272
nta-r.1
for
142177484
nta-r.1
for
142177463


Ortholog ID: 2300
Species ath ath bra bra bna bna bna ghi ghi ghi gma mtr mtr sly sly sly sot sot sot nta nta
Symbol PER4 AT1G14550 LOC103872253 LOC103842960 LOC111213093 LOC106402051 LOC106398523 LOC107952179 LOC107945916 LOC107921848 LOC100786161 LOC25492840 LOC11444576 LOC112940337 LOC112940333 LOC112940330 LOC102599501 LOC102597272 LOC102599828 LOC107794273 LOC107767062
Function* Peroxidase superfamily protein Peroxidase superfamily protein peroxidase 4 peroxidase 4-like peroxidase 4-like peroxidase 4 peroxidase 4 lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 7
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838016 838017 103872253 103842960 111213093 106402051 106398523 107952179 107945916 107921848 100786161 25492840 11444576 112940337 112940333 112940330 102599501 102597272 102599828 107794273 107767062
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