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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103842960   peroxidase 4-like 
 bra-r.6   103872253   peroxidase 4 
 bna-r.1   111198839   peroxidase 4-like 
 bna-r.1   111213093   peroxidase 4-like 
 bna-r.1   106402051   peroxidase 4 
 ath-u.5   PER4   Peroxidase superfamily protein 
 ath-u.5   AT1G14550   Peroxidase superfamily protein 
 ghi-r.1   107952179   lignin-forming anionic peroxidase 
 ghi-r.1   107945916   lignin-forming anionic peroxidase 
 ghi-r.1   107921848   lignin-forming anionic peroxidase 
 gma-u.5   100786161   lignin-forming anionic peroxidase 
 vvi-u.5   100259700   lignin-forming anionic peroxidase 
 mtr-u.5   11444576   lignin-forming anionic peroxidase 
 sly-u.5   101246783   lignin-forming anionic peroxidase 
 sly-u.5   112940330   lignin-forming anionic peroxidase 
 sot-r.1   102591445   lignin-forming anionic peroxidase-like 
 sot-r.1   102599501   lignin-forming anionic peroxidase 
 sot-r.1   102599828   lignin-forming anionic peroxidase-like 
 nta-r.1   142177484   lignin-forming anionic peroxidase-like 
 nta-r.1   142177463   lignin-forming anionic peroxidase-like 

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Top 50 coexpressed genes to 103842960 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103842960 (bra-r.6 coexpression data)

CoexMap"103842960"


braLOC103842960 | Entrez gene ID : 103842960    
Species bra bna ath ghi gma vvi mtr sly sot nta tae zma bdi osa ppo cit sbi hvu cre
Paralog 2 3 2 3 1 1 1 2 3 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00940 [list] [network] Phenylpropanoid biosynthesis (204 genes)
GO BP
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (146 genes)  IEA  
GO:0006979 [list] [network] response to oxidative stress  (254 genes)  IEA  
GO CC
GO MF
GO:0004601 [list] [network] peroxidase activity  (177 genes)  IEA  
GO:0020037 [list] [network] heme binding  (504 genes)  IEA  
Protein XP_033135599.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 3,  extr 1,  chlo_mito 1  (predict for XP_033135599.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_033135599.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103842960
bra-r.6
for
103872253
bna-r.1
for
111198839
bna-r.1
for
111213093
bna-r.1
for
106402051
ath-u.5
for
PER4
ath-u.5
for
AT1G14550
ghi-r.1
for
107952179
ghi-r.1
for
107945916
ghi-r.1
for
107921848
gma-u.5
for
100786161
vvi-u.5
for
100259700
mtr-u.5
for
11444576
sly-u.5
for
101246783
sly-u.5
for
112940330
sot-r.1
for
102591445
sot-r.1
for
102599501
sot-r.1
for
102599828
nta-r.1
for
142177484
nta-r.1
for
142177463


Ortholog ID: 2300
Species bra bra bna bna bna ath ath ghi ghi ghi gma mtr mtr sly sly sly sot sot sot nta nta
Symbol LOC103842960 LOC103872253 LOC111213093 LOC106402051 LOC106398523 PER4 AT1G14550 LOC107952179 LOC107945916 LOC107921848 LOC100786161 LOC11444576 LOC25492840 LOC112940330 LOC112940333 LOC112940337 LOC102599501 LOC102599828 LOC102597272 LOC107794273 LOC107767062
Function* peroxidase 4-like peroxidase 4 peroxidase 4-like peroxidase 4 peroxidase 4 Peroxidase superfamily protein Peroxidase superfamily protein lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase-like lignin-forming anionic peroxidase lignin-forming anionic peroxidase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 5
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 7
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103842960 103872253 111213093 106402051 106398523 838016 838017 107952179 107945916 107921848 100786161 11444576 25492840 112940330 112940333 112940337 102599501 102599828 102597272 107794273 107767062
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