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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   NIC1   nicotinamidase 1 
 ath-u.5   NIC1   nicotinamidase 1 
 ath-r.7   NIC1   nicotinamidase 1 
 ath-m.9   NIC1   nicotinamidase 1 
 ath-e.2   NIC1   nicotinamidase 1 
 ath-m.4.bio   NIC1   nicotinamidase 1 
 ath-m.4.hor   NIC1   nicotinamidase 1 
 ath-m.4.lig   NIC1   nicotinamidase 1 
 ath-m.4.str   NIC1   nicotinamidase 1 
 bra-r.6   103837878   nicotinamidase 1 
 bna-r.1   106413942   nicotinamidase 1 
 bna-r.1   106368683   nicotinamidase 1 
 ghi-r.1   107928947   nicotinamidase 1 
 ghi-r.1   107947380   nicotinamidase 1 
 ghi-r.1   107943737   nicotinamidase 1 
 cit-r.1   102627742   nicotinamidase 1-like 
 cit-r.1   102614194   nicotinamidase 1 
 gma-u.5   100814228   cysteine hydrolases superfamily protein 
 gma-u.5   100796282   nicotinamidase 1 
 vvi-u.5   100247829   nicotinamidase 1 
 ppo-u.5   7489775   nicotinamidase 1 
 ppo-u.5   7485029   nicotinamidase 1 
 mtr-u.5   11416429   nicotinamidase 1 
 mtr-u.5   11423702   nicotinamidase 1 
 sly-u.5   101265590   nicotinamidase 1 
 sly-u.5   101247977   nicotinamidase 1 
 sot-r.1   102588699   nicotinamidase 1-like 
 sot-r.1   102602851   nicotinamidase 1 
 nta-r.1   107769430   nicotinamidase 1-like 
 nta-r.1   107812261   nicotinamidase 1 
 nta-r.1   107827940   nicotinamidase 1-like 
 osa-u.5   4329929   nicotinamidase 1 
 zma-u.5   103653736   nicotinamidase 1 
 zma-u.5   100192753   uncharacterized LOC100192753 
 tae-r.2   123144753   nicotinamidase 1 
 tae-r.2   123137407   nicotinamidase 1 
 tae-r.2   123127653   nicotinamidase 1 
 hvu-r.1   123404047   nicotinamidase 1 
 sbi-r.1   110434627   nicotinamidase 1 
 bdi-r.1   100840144   nicotinamidase 1 

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Top 50 coexpressed genes to NIC1 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NIC1 (ath-m.4.tis coexpression data)

CoexMap"816789"


athNIC1 | Entrez gene ID : 816789      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 2 2 1 2 2 2 2 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0019365 [list] [network] pyridine nucleotide salvage  (1 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0008936 [list] [network] nicotinamidase activity  (3 genes)  IDA IMP  
Protein NP_565539.1 [sequence] [blastp]
NP_973511.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  extr 1,  E.R. 1  (predict for NP_565539.1)
chlo 4,  cyto 4,  extr 1  (predict for NP_973511.1)
Subcellular
localization
TargetP
other 9  (predict for NP_565539.1)
other 9  (predict for NP_973511.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
NIC1
ath-u.5
for
NIC1
ath-r.7
for
NIC1
ath-m.9
for
NIC1
ath-e.2
for
NIC1
ath-m.4.bio
for
NIC1
ath-m.4.hor
for
NIC1
ath-m.4.lig
for
NIC1
ath-m.4.str
for
NIC1
bra-r.6
for
103837878
bna-r.1
for
106413942
bna-r.1
for
106368683
ghi-r.1
for
107928947
ghi-r.1
for
107947380
ghi-r.1
for
107943737
cit-r.1
for
102627742
cit-r.1
for
102614194
gma-u.5
for
100814228
gma-u.5
for
100796282
vvi-u.5
for
100247829
ppo-u.5
for
7489775
ppo-u.5
for
7485029
mtr-u.5
for
11416429
mtr-u.5
for
11423702
sly-u.5
for
101265590
sly-u.5
for
101247977
sot-r.1
for
102588699
sot-r.1
for
102602851
nta-r.1
for
107769430
nta-r.1
for
107812261
nta-r.1
for
107827940
osa-u.5
for
4329929
zma-u.5
for
103653736
zma-u.5
for
100192753
tae-r.2
for
123144753
tae-r.2
for
123137407
tae-r.2
for
123127653
hvu-r.1
for
123404047
sbi-r.1
for
110434627
bdi-r.1
for
100840144


Ortholog ID: 6223
Species ath bra bna bna ghi ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol NIC1 LOC103837878 LOC106413942 LOC106368683 LOC107928947 LOC107947380 LOC107943737 LOC102627742 LOC102614194 LOC100814228 LOC100796282 LOC100247829 LOC7489775 LOC7485029 LOC11416429 LOC11423702 LOC101265590 LOC101247977 LOC102588699 LOC102602851 LOC107769430 LOC107812261 LOC107820986 LOC4329929 LOC103653736 LOC100192753 LOC123144753 LOC123137407 LOC123127653 LOC123404047 LOC110434627 LOC100840144
Function* nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1-like nicotinamidase 1 cysteine hydrolases superfamily protein nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1-like nicotinamidase 1 nicotinamidase 1-like nicotinamidase 1 nicotinamidase 1-like nicotinamidase 1 nicotinamidase 1 uncharacterized LOC100192753 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1 nicotinamidase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 4
bra01200 Carbon metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00230 Purine metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 4
gma00280 Valine, leucine and isoleucine degradation 4
gma00310 Lysine degradation 4
gma00330 Arginine and proline metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04142 Lysosome 3
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00650 Butanoate metabolism 3
mtr01200 Carbon metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sly01200 Carbon metabolism 3
sly00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00030 Pentose phosphate pathway 2
sot00270 Cysteine and methionine metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 6
nta00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma00514 Other types of O-glycan biosynthesis 3
zma04120 Ubiquitin mediated proteolysis 2
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00750 Vitamin B6 metabolism 3
tae00270 Cysteine and methionine metabolism 2
tae00920 Sulfur metabolism 2
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 3
tae00750 Vitamin B6 metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00270 Cysteine and methionine metabolism 2
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu00410 beta-Alanine metabolism 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816789 103837878 106413942 106368683 107928947 107947380 107943737 102627742 102614194 100814228 100796282 100247829 7489775 7485029 11416429 11423702 101265590 101247977 102588699 102602851 107769430 107812261 107820986 4329929 103653736 100192753 123144753 123137407 123127653 123404047 110434627 100840144
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