Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   RD20   Caleosin-related family protein 
 ath-u.5   RD20   Caleosin-related family protein 
 ath-r.7   RD20   Caleosin-related family protein 
 ath-m.9   RD20   Caleosin-related family protein 
 ath-e.2   RD20   Caleosin-related family protein 
 ath-m.4.bio   RD20   Caleosin-related family protein 
 ath-m.4.hor   RD20   Caleosin-related family protein 
 ath-m.4.lig   RD20   Caleosin-related family protein 
 ath-m.4.str   RD20   Caleosin-related family protein 
 ath-u.5   ATS1   peroxygenase 1 
 ath-u.5   ATPXG2   PEROXYGENASE 2 
 bra-r.6   103865264   probable peroxygenase 3 
 bra-r.6   103857486   probable peroxygenase 3 
 bna-r.1   106428308   peroxygenase 1-like 
 bna-r.1   106388032   probable peroxygenase 3 
 ghi-r.1   107891891   probable peroxygenase 3 
 ghi-r.1   107891892   probable peroxygenase 3 
 ghi-r.1   107891893   peroxygenase 
 cit-r.1   102607396   peroxygenase 
 gma-u.5   PM13   Ca+2-binding EF hand protein 
 gma-u.5   100802743   peroxygenase 2 
 gma-u.5   100813066   caleosin domain-containing protein 
 vvi-u.5   100264814   peroxygenase 
 ppo-u.5   7459986   peroxygenase 1 
 sly-u.5   101244941   caleosin 
 osa-u.5   9267086   peroxygenase 
 osa-u.5   4336376   peroxygenase-like 
 osa-u.5   4332103   peroxygenase 
 zma-u.5   100382264   uncharacterized LOC100382264 
 zma-u.5   100285543   caleosin 
 zma-u.5   100216957   uncharacterized LOC100216957 
 tae-r.2   123085142   peroxygenase 
 tae-r.2   123041702   peroxygenase 1 
 hvu-r.1   123430511   peroxygenase-like 
 hvu-r.1   123430519   peroxygenase-like 
 sbi-r.1   8085281   peroxygenase 
 sbi-r.1   8085282   peroxygenase 
 bdi-r.1   100841608   peroxygenase 
 bdi-r.1   100841002   peroxygenase 
 bdi-r.1   100825343   probable peroxygenase 3 

close


Top 50 coexpressed genes to RD20 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to RD20 (ath-m.4.tis coexpression data)

CoexMap"817901"


athRD20 | Entrez gene ID : 817901      
Species ath bra bna ghi cit gma vvi ppo sly osa zma tae hvu sbi bdi cre sot nta mtr
Paralog 11 2 2 3 1 3 1 1 1 3 3 2 2 2 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00073 [list] [network] Cutin, suberine and wax biosynthesis (43 genes)
GO BP
GO:1902609 [list] [network] (R)-2-hydroxy-alpha-linolenic acid biosynthetic process  (2 genes)  IMP  
GO:0031407 [list] [network] oxylipin metabolic process  (9 genes)  IDA  
GO:0009269 [list] [network] response to desiccation  (24 genes)  IEP TAS  
GO:0010118 [list] [network] stomatal movement  (63 genes)  IMP  
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process  (65 genes)  IMP  
GO:0009751 [list] [network] response to salicylic acid  (179 genes)  IEP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IDA  
GO:0009620 [list] [network] response to fungus  (400 genes)  IEP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO CC
GO:0012511 [list] [network] monolayer-surrounded lipid storage body  (11 genes)  IDA  
GO:0031969 [list] [network] chloroplast membrane  (123 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19211 genes)  IDA  
GO MF
GO:1990137 [list] [network] plant seed peroxygenase activity  (2 genes)  IDA  
GO:0005509 [list] [network] calcium ion binding  (158 genes)  IDA TAS  
Protein NP_001031472.1 [sequence] [blastp]
NP_180896.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cysk 3,  cysk_nucl 3,  cyto 2  (predict for NP_001031472.1)
cysk 8,  cyto 1,  cyto_E.R. 1  (predict for NP_180896.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001031472.1)
other 6,  chlo 5  (predict for NP_180896.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
RD20
ath-u.5
for
RD20
ath-r.7
for
RD20
ath-m.9
for
RD20
ath-e.2
for
RD20
ath-m.4.bio
for
RD20
ath-m.4.hor
for
RD20
ath-m.4.lig
for
RD20
ath-m.4.str
for
RD20
ath-u.5
for
ATS1
ath-u.5
for
ATPXG2
bra-r.6
for
103865264
bra-r.6
for
103857486
bna-r.1
for
106428308
bna-r.1
for
106388032
ghi-r.1
for
107891891
ghi-r.1
for
107891892
ghi-r.1
for
107891893
cit-r.1
for
102607396
gma-u.5
for
PM13
gma-u.5
for
100802743
gma-u.5
for
100813066
vvi-u.5
for
100264814
ppo-u.5
for
7459986
sly-u.5
for
101244941
osa-u.5
for
9267086
osa-u.5
for
4336376
osa-u.5
for
4332103
zma-u.5
for
100382264
zma-u.5
for
100285543
zma-u.5
for
100216957
tae-r.2
for
123085142
tae-r.2
for
123041702
hvu-r.1
for
123430511
hvu-r.1
for
123430519
sbi-r.1
for
8085281
sbi-r.1
for
8085282
bdi-r.1
for
100841608
bdi-r.1
for
100841002
bdi-r.1
for
100825343


Ortholog ID: 1101
Species ath ath bra bna bna ghi ghi ghi cit gma gma gma vvi ppo sly osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi
Symbol ATS1 ATPXG2 LOC103857486 LOC111197698 LOC106445076 LOC107888899 LOC107888897 LOC107888896 LOC102607396 PM13 LOC100802743 LOC100813066 LOC100264814 LOC7459986 LOC101244941 LOC9267086 LOC4336376 LOC4332103 LOC100382264 LOC100285543 LOC100216957 LOC123053883 LOC123185704 LOC123189769 LOC123430511 LOC123430519 LOC123430517 LOC8085281 LOC8085282 LOC100841608 LOC100841002 LOC100825343
Function* peroxygenase 1 PEROXYGENASE 2 probable peroxygenase 3 probable peroxygenase 3 peroxygenase 1-like peroxygenase peroxygenase probable peroxygenase 3 peroxygenase Ca+2-binding EF hand protein peroxygenase 2 caleosin domain-containing protein peroxygenase peroxygenase 1 caleosin peroxygenase peroxygenase-like peroxygenase uncharacterized LOC100382264 caleosin uncharacterized LOC100216957 peroxygenase peroxygenase peroxygenase peroxygenase-like peroxygenase-like peroxygenase-like peroxygenase peroxygenase peroxygenase peroxygenase probable peroxygenase 3
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 3
bra00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 3
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 7
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 7
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00052 Galactose metabolism 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 7
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00040 Pentose and glucuronate interconversions 2
tae00053 Ascorbate and aldarate metabolism 2
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00310 Lysine degradation 3
hvu00260 Glycine, serine and threonine metabolism 2
hvu00280 Valine, leucine and isoleucine degradation 2
hvu00330 Arginine and proline metabolism 2
hvu00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00310 Lysine degradation 3
hvu00260 Glycine, serine and threonine metabolism 2
hvu00280 Valine, leucine and isoleucine degradation 2
hvu00410 beta-Alanine metabolism 2
hvu00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828781 835617 103857486 111197698 106445076 107888899 107888897 107888896 102607396 547497 100802743 100813066 100264814 7459986 101244941 9267086 4336376 4332103 100382264 100285543 100216957 123053883 123185704 123189769 123430511 123430519 123430517 8085281 8085282 100841608 100841002 100825343
The preparation time of this page was 0.1 [sec].