ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100216957	uncharacterized LOC100216957
zma-r.6	100216957	uncharacterized LOC100216957
zma-u.5	100382264	uncharacterized LOC100382264
zma-u.5	100285543	caleosin
sbi-r.1	8085282	peroxygenase
sbi-r.1	8085281	peroxygenase
osa-u.5	4336376	peroxygenase-like
osa-u.5	4332103	peroxygenase
osa-u.5	9267086	peroxygenase
tae-r.2	123049602	peroxygenase
tae-r.2	123085142	peroxygenase
hvu-r.1	123430511	peroxygenase-like
hvu-r.1	123449281	peroxygenase-like
bdi-r.1	100841608	peroxygenase
bdi-r.1	100841002	peroxygenase
bdi-r.1	100825343	probable peroxygenase 3
ath-u.5	RD20	Caleosin-related family protein
ath-u.5	ATS1	peroxygenase 1
gma-u.5	PM13	Ca+2-binding EF hand protein
gma-u.5	100802743	peroxygenase 2
gma-u.5	100813066	caleosin domain-containing protein
sly-u.5	101244941	caleosin
bra-r.6	103865264	probable peroxygenase 3
bra-r.6	103857486	probable peroxygenase 3
vvi-u.5	100264814	peroxygenase
ppo-u.5	7459986	peroxygenase 1
ghi-r.1	107891891	probable peroxygenase 3
ghi-r.1	107891892	probable peroxygenase 3
ghi-r.1	107891893	peroxygenase
bna-r.1	106428308	peroxygenase 1-like
bna-r.1	106388032	probable peroxygenase 3
cit-r.1	102607396	peroxygenase

Annotation

functional annotation

KEGG

zma00073 [list] [network] Cutin, suberine and wax biosynthesis (35 genes)

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding	(329 genes)	IEA
GO:0004497 [list] [network] monooxygenase activity	(355 genes)	IEA

Protein

NP_001136811.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 2, plas 2, chlo_mito 2, cyto_plas 2

(predict for NP_001136811.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for NP_001136811.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100216957	zma-r.6 for 100216957	zma-u.5 for 100382264	zma-u.5 for 100285543	sbi-r.1 for 8085282	sbi-r.1 for 8085281	osa-u.5 for 4336376	osa-u.5 for 4332103	osa-u.5 for 9267086	tae-r.2 for 123049602	tae-r.2 for 123085142	hvu-r.1 for 123430511	hvu-r.1 for 123449281	bdi-r.1 for 100841608	bdi-r.1 for 100841002	bdi-r.1 for 100825343	ath-u.5 for RD20	ath-u.5 for ATS1	gma-u.5 for PM13	gma-u.5 for 100802743	gma-u.5 for 100813066	sly-u.5 for 101244941	bra-r.6 for 103865264	bra-r.6 for 103857486	vvi-u.5 for 100264814	ppo-u.5 for 7459986	ghi-r.1 for 107891891	ghi-r.1 for 107891892	ghi-r.1 for 107891893	bna-r.1 for 106428308	bna-r.1 for 106388032	cit-r.1 for 102607396

Ortholog

Ortholog ID: 1101

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

ghi

bna

cit

Symbol

ATS1

ATPXG2

PM13

Function^*

uncharacterized LOC100216957

uncharacterized LOC100382264

caleosin

peroxygenase

peroxygenase-like

peroxygenase

peroxygenase-like

peroxygenase

probable peroxygenase 3

peroxygenase 1

PEROXYGENASE 2

Ca+2-binding EF hand protein

peroxygenase 2

caleosin domain-containing protein

caleosin

probable peroxygenase 3

peroxygenase

peroxygenase 1

peroxygenase

probable peroxygenase 3

peroxygenase 1-like

peroxygenase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	2
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi03013	Nucleocytoplasmic transport	2
sbi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	7
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	3
tae00010	Glycolysis / Gluconeogenesis	2
tae00040	Pentose and glucuronate interconversions	2
tae00053	Ascorbate and aldarate metabolism	2
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00310	Lysine degradation	3
hvu00260	Glycine, serine and threonine metabolism	2
hvu00280	Valine, leucine and isoleucine degradation	2
hvu00330	Arginine and proline metabolism	2
hvu00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00310	Lysine degradation	3
hvu00260	Glycine, serine and threonine metabolism	2
hvu00280	Valine, leucine and isoleucine degradation	2
hvu00410	beta-Alanine metabolism	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00592	alpha-Linolenic acid metabolism	3
bra00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00052	Galactose metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	7
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	7
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	3
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00630	Glyoxylate and dicarboxylate metabolism	2
cit01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100216957

100382264

100285543

8085282

8085281

4336376

4332103

9267086

123053883

123185704

123189769

123430511

123430519

123430517

100841608

100841002

100825343

828781

835617

547497

100802743

100813066

101244941

103857486

100264814

7459986

107888899

107888897

107888896

111197698

106445076

102607396

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100216957 (zma-u.5 coexpression data)

Top 50 enrichment test to 100216957 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	ghi	bna	cit	mtr	sot	nta	cre
Paralog	4	2	3	2	2	3	2	3	1	2	1	1	3	2	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100216957 (zma-u.5 coexpression data)

Top 50 enrichment test to 100216957 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**