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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-m.9   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-m.4.bio   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-m.4.hor   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-m.4.lig   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-m.4.str   AT3G02790   zinc finger (C2H2 type) family protein 
 ath-u.5   AT5G16470   zinc finger (C2H2 type) family protein 
 bra-r.6   103851046   protein METHYLENE BLUE SENSITIVITY 2 
 bra-r.6   103856199   protein METHYLENE BLUE SENSITIVITY 2 
 bra-r.6   103870893   protein METHYLENE BLUE SENSITIVITY 1 
 bna-r.1   125581286   protein METHYLENE BLUE SENSITIVITY 2 
 bna-r.1   125587559   protein METHYLENE BLUE SENSITIVITY 1-like 
 bna-r.1   125593962   protein METHYLENE BLUE SENSITIVITY 2 
 ghi-r.1   107959487   protein METHYLENE BLUE SENSITIVITY 1 
 ghi-r.1   107959412   protein METHYLENE BLUE SENSITIVITY 1 
 ghi-r.1   107909097   protein METHYLENE BLUE SENSITIVITY 1 
 cit-r.1   102622160   protein METHYLENE BLUE SENSITIVITY 1-like 
 gma-u.5   100788257   protein METHYLENE BLUE SENSITIVITY 1 
 gma-u.5   100784149   protein METHYLENE BLUE SENSITIVITY 1 
 vvi-u.5   100253066   uncharacterized LOC100253066 
 ppo-u.5   7477691   protein METHYLENE BLUE SENSITIVITY 1 
 ppo-u.5   7455210   protein METHYLENE BLUE SENSITIVITY 1 
 mtr-u.5   11408160   protein METHYLENE BLUE SENSITIVITY 2 
 sly-u.5   101256581   protein METHYLENE BLUE SENSITIVITY 1 
 sot-r.1   102577744   uncharacterized LOC102577744 
 nta-r.1   107786661   protein METHYLENE BLUE SENSITIVITY 1-like 
 nta-r.1   107810969   protein METHYLENE BLUE SENSITIVITY 1 
 osa-u.5   4342023   protein METHYLENE BLUE SENSITIVITY 1 
 zma-u.5   100274838   uncharacterized LOC100274838 
 zma-u.5   100192567   uncharacterized LOC100192567 
 tae-r.2   123164450   protein METHYLENE BLUE SENSITIVITY 1 
 tae-r.2   123162566   protein METHYLENE BLUE SENSITIVITY 1 
 tae-r.2   100682502   protein METHYLENE BLUE SENSITIVITY 2 
 hvu-r.1   123407253   protein METHYLENE BLUE SENSITIVITY 2-like 
 sbi-r.1   8064966   uncharacterized LOC8064966 
 bdi-r.1   100828468   uncharacterized LOC100828468 
 cre-r.1   CHLRE_09g416500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G02790 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G02790 (ath-m.4.tis coexpression data)

CoexMap"820985"


athAT3G02790 | Entrez gene ID : 820985      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 7 3 3 3 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071452 [list] [network] cellular response to singlet oxygen  (8 genes)  IMP  
GO:0080183 [list] [network] response to photooxidative stress  (13 genes)  IMP  
GO:0009631 [list] [network] cold acclimation  (60 genes)  IMP  
GO:1900055 [list] [network] regulation of leaf senescence  (62 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (71 genes)  IEP IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (143 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_566182.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto 3,  chlo_mito 3,  cyto_mito 3,  mito_plas 3  (predict for NP_566182.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566182.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT3G02790
ath-m.9
for
AT3G02790
ath-m.4.bio
for
AT3G02790
ath-m.4.hor
for
AT3G02790
ath-m.4.lig
for
AT3G02790
ath-m.4.str
for
AT3G02790
ath-u.5
for
AT5G16470
bra-r.6
for
103851046
bra-r.6
for
103856199
bra-r.6
for
103870893
bna-r.1
for
125581286
bna-r.1
for
125587559
bna-r.1
for
125593962
ghi-r.1
for
107959487
ghi-r.1
for
107959412
ghi-r.1
for
107909097
cit-r.1
for
102622160
gma-u.5
for
100788257
gma-u.5
for
100784149
vvi-u.5
for
100253066
ppo-u.5
for
7477691
ppo-u.5
for
7455210
mtr-u.5
for
11408160
sly-u.5
for
101256581
sot-r.1
for
102577744
nta-r.1
for
107786661
nta-r.1
for
107810969
osa-u.5
for
4342023
zma-u.5
for
100274838
zma-u.5
for
100192567
tae-r.2
for
123164450
tae-r.2
for
123162566
tae-r.2
for
100682502
hvu-r.1
for
123407253
sbi-r.1
for
8064966
bdi-r.1
for
100828468
cre-r.1
for
CHLRE_09g416500v5


Ortholog ID: 4240
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT5G16470 LOC103851046 LOC103856199 LOC103870893 LOC125587559 LOC106354456 BNAC03G07800D LOC107959412 LOC107918346 LOC107928383 LOC102622160 LOC100788257 LOC100784149 LOC100253066 LOC7477691 LOC7455210 LOC11408160 LOC101256581 LOC102577744 LOC107786661 LOC107810969 LOC4342023 LOC100274838 LOC100192567 LOC123164450 LOC123162566 LOC100682502 LOC123407253 LOC8064966 LOC100828468 CHLRE_09g416500v5
Function* zinc finger (C2H2 type) family protein protein METHYLENE BLUE SENSITIVITY 2 protein METHYLENE BLUE SENSITIVITY 2 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1-like protein METHYLENE BLUE SENSITIVITY 2-like protein METHYLENE BLUE SENSITIVITY 2 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1-like protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 uncharacterized LOC100253066 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 2 protein METHYLENE BLUE SENSITIVITY 1 uncharacterized LOC102577744 protein METHYLENE BLUE SENSITIVITY 1-like protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 uncharacterized LOC100274838 uncharacterized LOC100192567 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 1 protein METHYLENE BLUE SENSITIVITY 2 protein METHYLENE BLUE SENSITIVITY 2-like uncharacterized LOC8064966 uncharacterized LOC100828468 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04075 Plant hormone signal transduction 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 4
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 4
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
bna00240 Pyrimidine metabolism 3
bna01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 6
ghi04016 MAPK signaling pathway - plant 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04075 Plant hormone signal transduction 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi03272 Virion - Hepatitis viruses 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04144 Endocytosis 3
gma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04145 Phagosome 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta03083 Polycomb repressive complex 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa00900 Terpenoid backbone biosynthesis 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03083 Polycomb repressive complex 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831508 103851046 103856199 103870893 125587559 106354456 106433360 107959412 107918346 107928383 102622160 100788257 100784149 100253066 7477691 7455210 11408160 101256581 102577744 107786661 107810969 4342023 100274838 100192567 123164450 123162566 100682502 123407253 8064966 100828468 5722389
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