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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-u.5   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-r.7   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-m.9   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-e.2   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-m.4.bio   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-m.4.hor   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-m.4.lig   AT3G59630   diphthamide synthesis DPH2 family protein 
 ath-m.4.str   AT3G59630   diphthamide synthesis DPH2 family protein 
 bra-r.6   103841808   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 bna-r.1   106368444   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 bna-r.1   111209164   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 ghi-r.1   107899059   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 ghi-r.1   107890838   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 cit-r.1   102620278   uncharacterized LOC102620278 
 gma-u.5   100808845   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 vvi-u.5   100262956   uncharacterized LOC100262956 
 ppo-u.5   18100150   uncharacterized LOC18100150 
 mtr-u.5   11429602   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 sly-u.5   101264686   uncharacterized LOC101264686 
 sot-r.1   102595478   diphthamide biosynthesis protein 2 
 nta-r.1   107829003   uncharacterized LOC107829003 
 nta-r.1   107781343   uncharacterized LOC107781343 
 osa-u.5   4350247   uncharacterized LOC4350247 
 zma-u.5   100279605   uncharacterized LOC100279605 
 tae-r.2   123091172   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 tae-r.2   123086805   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 tae-r.2   123096172   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 hvu-r.1   123447802   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 sbi-r.1   8079641   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 bdi-r.1   100837924   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 cre-r.1   CHLRE_08g376150v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G59630 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G59630 (ath-m.4.tis coexpression data)

CoexMap"825132"


athAT3G59630 | Entrez gene ID : 825132      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327299.1 [sequence] [blastp]
NP_001327300.1 [sequence] [blastp]
NP_191522.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cysk 1  (predict for NP_001327299.1)
nucl 4,  cysk 4,  cysk_nucl 4  (predict for NP_001327300.1)
nucl 4,  cysk 4,  cysk_nucl 4  (predict for NP_191522.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001327299.1)
other 8  (predict for NP_001327300.1)
other 8  (predict for NP_191522.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT3G59630
ath-u.5
for
AT3G59630
ath-r.7
for
AT3G59630
ath-m.9
for
AT3G59630
ath-e.2
for
AT3G59630
ath-m.4.bio
for
AT3G59630
ath-m.4.hor
for
AT3G59630
ath-m.4.lig
for
AT3G59630
ath-m.4.str
for
AT3G59630
bra-r.6
for
103841808
bna-r.1
for
106368444
bna-r.1
for
111209164
ghi-r.1
for
107899059
ghi-r.1
for
107890838
cit-r.1
for
102620278
gma-u.5
for
100808845
vvi-u.5
for
100262956
ppo-u.5
for
18100150
mtr-u.5
for
11429602
sly-u.5
for
101264686
sot-r.1
for
102595478
nta-r.1
for
107829003
nta-r.1
for
107781343
osa-u.5
for
4350247
zma-u.5
for
100279605
tae-r.2
for
123091172
tae-r.2
for
123086805
tae-r.2
for
123096172
hvu-r.1
for
123447802
sbi-r.1
for
8079641
bdi-r.1
for
100837924
cre-r.1
for
CHLRE_08g376150v5


Ortholog ID: 10833
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G59630 LOC103841808 LOC106368444 LOC111209164 LOC107899059 LOC107890838 LOC102620278 LOC100808845 LOC100262956 LOC18100150 LOC11429602 LOC101264686 LOC102595478 LOC107829003 LOC107781343 LOC4350247 LOC100279605 LOC123091172 LOC123086805 LOC123096172 LOC123447802 LOC8079641 LOC100837924 CHLRE_08g376150v5
Function* diphthamide synthesis DPH2 family protein 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC102620278 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC100262956 uncharacterized LOC18100150 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC101264686 diphthamide biosynthesis protein 2 uncharacterized LOC107829003 uncharacterized LOC107781343 uncharacterized LOC4350247 uncharacterized LOC100279605 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825132 103841808 106368444 111209164 107899059 107890838 102620278 100808845 100262956 18100150 11429602 101264686 102595478 107829003 107781343 4350247 100279605 123091172 123086805 123096172 123447802 8079641 100837924 5719941
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