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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-u.5   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-r.7   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-m.9   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-e.2   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-m.4.bio   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-m.4.hor   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-m.4.lig   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-m.4.str   AT5G24450   Transcription factor IIIC, subunit 5 
 ath-u.5   AT3G49410   Transcription factor IIIC, subunit 5 
 bra-r.6   103875342   general transcription factor 3C polypeptide 5 
 bra-r.6   103854858   general transcription factor 3C polypeptide 5 
 bna-r.1   125581995   general transcription factor 3C polypeptide 5-like 
 bna-r.1   125581996   general transcription factor 3C polypeptide 5-like 
 bna-r.1   106423965   general transcription factor 3C polypeptide 5 
 ghi-r.1   107946819   general transcription factor 3C polypeptide 5 
 ghi-r.1   107913018   general transcription factor 3C polypeptide 5 
 cit-r.1   102610199   uncharacterized LOC102610199 
 gma-u.5   100819979   general transcription factor 3C polypeptide 5 
 vvi-u.5   100247425   uncharacterized LOC100247425 
 ppo-u.5   7465611   uncharacterized LOC7465611 
 mtr-u.5   11409861   general transcription factor 3C polypeptide 5 
 sly-u.5   101264493   uncharacterized LOC101264493 
 sot-r.1   102591133   general transcription factor 3C polypeptide 5-like 
 nta-r.1   107762827   uncharacterized LOC107762827 
 nta-r.1   107773035   uncharacterized LOC107773035 
 nta-r.1   107800139   uncharacterized LOC107800139 
 osa-u.5   4323940   uncharacterized LOC4323940 
 zma-u.5   100192729   uncharacterized LOC100192729 
 tae-r.2   123066744   general transcription factor 3C polypeptide 5 
 tae-r.2   123182947   general transcription factor 3C polypeptide 5 
 tae-r.2   123144203   general transcription factor 3C polypeptide 5 
 hvu-r.1   123449368   general transcription factor 3C polypeptide 5-like 
 sbi-r.1   8063766   general transcription factor 3C polypeptide 5 
 bdi-r.1   100838866   general transcription factor 3C polypeptide 5 
 cre-r.1   CHLRE_13g576250v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G24450 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G24450 (ath-m.4.tis coexpression data)

CoexMap"832516"


athAT5G24450 | Entrez gene ID : 832516      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 1 1 1 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006384 [list] [network] transcription initiation at RNA polymerase III promoter  (8 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001330523.1 [sequence] [blastp]
NP_197833.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001330523.1)
nucl 9  (predict for NP_197833.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001330523.1)
other 8  (predict for NP_197833.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT5G24450
ath-u.5
for
AT5G24450
ath-r.7
for
AT5G24450
ath-m.9
for
AT5G24450
ath-e.2
for
AT5G24450
ath-m.4.bio
for
AT5G24450
ath-m.4.hor
for
AT5G24450
ath-m.4.lig
for
AT5G24450
ath-m.4.str
for
AT5G24450
ath-u.5
for
AT3G49410
bra-r.6
for
103875342
bra-r.6
for
103854858
bna-r.1
for
125581995
bna-r.1
for
125581996
bna-r.1
for
106423965
ghi-r.1
for
107946819
ghi-r.1
for
107913018
cit-r.1
for
102610199
gma-u.5
for
100819979
vvi-u.5
for
100247425
ppo-u.5
for
7465611
mtr-u.5
for
11409861
sly-u.5
for
101264493
sot-r.1
for
102591133
nta-r.1
for
107762827
nta-r.1
for
107773035
nta-r.1
for
107800139
osa-u.5
for
4323940
zma-u.5
for
100192729
tae-r.2
for
123066744
tae-r.2
for
123182947
tae-r.2
for
123144203
hvu-r.1
for
123449368
sbi-r.1
for
8063766
bdi-r.1
for
100838866
cre-r.1
for
CHLRE_13g576250v5


Ortholog ID: 6016
Species ath ath bra bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G24450 AT3G49410 LOC103875342 LOC103854858 LOC106423965 LOC106382605 LOC107946819 LOC107913018 LOC102610199 LOC100819979 LOC100247425 LOC7465611 LOC11409861 LOC101264493 LOC102591133 LOC107773035 LOC107800139 LOC107812107 LOC4323940 LOC100192729 LOC123066744 LOC123182947 LOC123144203 LOC123449368 LOC8063766 LOC100838866 CHLRE_13g576250v5
Function* Transcription factor IIIC, subunit 5 Transcription factor IIIC, subunit 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5-like general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 uncharacterized LOC102610199 general transcription factor 3C polypeptide 5 uncharacterized LOC100247425 uncharacterized LOC7465611 general transcription factor 3C polypeptide 5 uncharacterized LOC101264493 general transcription factor 3C polypeptide 5-like uncharacterized LOC107773035 uncharacterized LOC107800139 uncharacterized LOC107812107 uncharacterized LOC4323940 uncharacterized LOC100192729 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5-like general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
vvi04814 Motor proteins 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 2
mtr04382 Cornified envelope formation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832516 824103 103875342 103854858 106423965 106382605 107946819 107913018 102610199 100819979 100247425 7465611 11409861 101264493 102591133 107773035 107800139 107812107 4323940 100192729 123066744 123182947 123144203 123449368 8063766 100838866 5719238
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