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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102591133   general transcription factor 3C polypeptide 5-like 
 sly-u.5   101264493   uncharacterized LOC101264493 
 nta-r.1   107812107   uncharacterized LOC107812107 
 nta-r.1   107800139   uncharacterized LOC107800139 
 nta-r.1   107773035   uncharacterized LOC107773035 
 ath-u.5   AT3G49410   Transcription factor IIIC, subunit 5 
 ath-u.5   AT5G24450   Transcription factor IIIC, subunit 5 
 gma-u.5   100819979   general transcription factor 3C polypeptide 5 
 bra-r.6   103875342   general transcription factor 3C polypeptide 5 
 bra-r.6   103854858   general transcription factor 3C polypeptide 5 
 vvi-u.5   100247425   uncharacterized LOC100247425 
 ppo-u.5   7465611   uncharacterized LOC7465611 
 mtr-u.5   11409861   general transcription factor 3C polypeptide 5 
 ghi-r.1   107946819   general transcription factor 3C polypeptide 5 
 ghi-r.1   107913018   general transcription factor 3C polypeptide 5 
 bna-r.1   125581995   general transcription factor 3C polypeptide 5-like 
 bna-r.1   125581996   general transcription factor 3C polypeptide 5-like 
 bna-r.1   106423965   general transcription factor 3C polypeptide 5 
 cit-r.1   102610199   uncharacterized LOC102610199 
 osa-u.5   4323940   uncharacterized LOC4323940 
 zma-u.5   100192729   uncharacterized LOC100192729 
 tae-r.2   123182947   general transcription factor 3C polypeptide 5 
 tae-r.2   123066744   general transcription factor 3C polypeptide 5 
 tae-r.2   123144203   general transcription factor 3C polypeptide 5 
 hvu-r.1   123449368   general transcription factor 3C polypeptide 5-like 
 sbi-r.1   8063766   general transcription factor 3C polypeptide 5 
 bdi-r.1   100838866   general transcription factor 3C polypeptide 5 
 cre-r.1   CHLRE_13g576250v5   uncharacterized protein 

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Top 50 coexpressed genes to 102591133 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102591133 (sot-r.1 coexpression data)

CoexMap"102591133"


sotLOC102591133 | Entrez gene ID : 102591133    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 3 2 1 2 1 1 1 2 3 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006384 [list] [network] transcription initiation at RNA polymerase III promoter  (7 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (8 genes)  IEA  
GO MF
GO:0001002 [list] [network] RNA polymerase III type 1 promoter sequence-specific DNA binding  (1 genes)  IEA  
GO:0001003 [list] [network] RNA polymerase III type 2 promoter sequence-specific DNA binding  (1 genes)  IEA  
Protein XP_006350004.1 [sequence] [blastp]
XP_006350005.1 [sequence] [blastp]
XP_006350006.1 [sequence] [blastp]
XP_015165337.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006350004.1)
vacu 4,  chlo 3,  extr 2,  E.R._vacu 2  (predict for XP_006350005.1)
nucl 9  (predict for XP_006350006.1)
nucl 9  (predict for XP_015165337.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006350004.1)
mito 6,  scret 5  (predict for XP_006350005.1)
other 8  (predict for XP_006350006.1)
other 8  (predict for XP_015165337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102591133
sly-u.5
for
101264493
nta-r.1
for
107812107
nta-r.1
for
107800139
nta-r.1
for
107773035
ath-u.5
for
AT3G49410
ath-u.5
for
AT5G24450
gma-u.5
for
100819979
bra-r.6
for
103875342
bra-r.6
for
103854858
vvi-u.5
for
100247425
ppo-u.5
for
7465611
mtr-u.5
for
11409861
ghi-r.1
for
107946819
ghi-r.1
for
107913018
bna-r.1
for
125581995
bna-r.1
for
125581996
bna-r.1
for
106423965
cit-r.1
for
102610199
osa-u.5
for
4323940
zma-u.5
for
100192729
tae-r.2
for
123182947
tae-r.2
for
123066744
tae-r.2
for
123144203
hvu-r.1
for
123449368
sbi-r.1
for
8063766
bdi-r.1
for
100838866
cre-r.1
for
CHLRE_13g576250v5


Ortholog ID: 6016
Species sot sly nta nta nta ath ath gma bra bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102591133 LOC101264493 LOC107812107 LOC107800139 LOC107773035 AT3G49410 AT5G24450 LOC100819979 LOC103875342 LOC103854858 LOC100247425 LOC7465611 LOC11409861 LOC107946819 LOC107913018 LOC106423965 LOC106382605 LOC102610199 LOC4323940 LOC100192729 LOC123182947 LOC123066744 LOC123144203 LOC123449368 LOC8063766 LOC100838866 CHLRE_13g576250v5
Function* general transcription factor 3C polypeptide 5-like uncharacterized LOC101264493 uncharacterized LOC107812107 uncharacterized LOC107800139 uncharacterized LOC107773035 Transcription factor IIIC, subunit 5 Transcription factor IIIC, subunit 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 uncharacterized LOC100247425 uncharacterized LOC7465611 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5-like uncharacterized LOC102610199 uncharacterized LOC4323940 uncharacterized LOC100192729 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5-like general transcription factor 3C polypeptide 5 general transcription factor 3C polypeptide 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
vvi04814 Motor proteins 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 2
mtr04382 Cornified envelope formation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102591133 101264493 107812107 107800139 107773035 824103 832516 100819979 103875342 103854858 100247425 7465611 11409861 107946819 107913018 106423965 106382605 102610199 4323940 100192729 123182947 123066744 123144203 123449368 8063766 100838866 5719238
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