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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   SPL2   squamosa promoter binding protein-like 2 
 ath-u.5   SPL2   squamosa promoter binding protein-like 2 
 ath-r.7   SPL2   squamosa promoter binding protein-like 2 
 ath-m.9   SPL2   squamosa promoter binding protein-like 2 
 ath-e.2   SPL2   squamosa promoter binding protein-like 2 
 ath-m.4.bio   SPL2   squamosa promoter binding protein-like 2 
 ath-m.4.hor   SPL2   squamosa promoter binding protein-like 2 
 ath-m.4.lig   SPL2   squamosa promoter binding protein-like 2 
 ath-m.4.str   SPL2   squamosa promoter binding protein-like 2 
 bra-r.6   103839253   squamosa promoter-binding-like protein 2 
 bra-r.6   103827978   squamosa promoter-binding-like protein 2 
 bna-r.1   106447058   squamosa promoter-binding-like protein 2 
 bna-r.1   106366623   squamosa promoter-binding-like protein 2 
 bna-r.1   106349550   squamosa promoter-binding-like protein 2 
 ghi-r.1   107916524   squamosa promoter-binding-like protein 2 
 ghi-r.1   107933376   squamosa promoter-binding-like protein 2 
 ghi-r.1   107898614   squamosa promoter-binding-like protein 2 
 cit-r.1   102611597   squamosa promoter-binding-like protein 2 
 gma-u.5   100796013   squamosa promoter-binding-like protein 12-like 
 gma-u.5   100781289   squamosa promoter-binding-like protein 12 
 vvi-u.5   100246757   promoter-binding protein SPL10 
 vvi-u.5   100254075   squamosa promoter-binding-like protein 2 
 ppo-u.5   7482783   squamosa promoter-binding-like protein 2 
 ppo-u.5   18107887   squamosa promoter-binding-like protein 12 
 ppo-u.5   7481229   squamosa promoter-binding-like protein 2 
 mtr-u.5   11441057   squamosa promoter-binding-like protein 12 
 sly-u.5   101246055   squamosa promoter-binding-like protein 12 
 sly-u.5   101245642   squamosa promoter-binding-like protein 3 
 sot-r.1   102588591   squamosa promoter-binding-like protein 12 
 sot-r.1   102605918   squamosa promoter-binding-like protein 12 
 nta-r.1   107822648   squamosa promoter-binding-like protein 3 
 nta-r.1   107785188   squamosa promoter-binding-like protein 12 
 nta-r.1   107781982   squamosa promoter-binding-like protein 2 
 osa-u.5   4341986   squamosa promoter-binding-like protein 12 
 osa-u.5   9270639   squamosa promoter-binding-like protein 3 
 zma-u.5   sbp20   SBP-transcription factor 20 
 zma-u.5   sbp25   SBP-transcription factor 25 
 zma-u.5   sbp27   SBP-transcription factor 27 
 tae-r.2   123132182   squamosa promoter-binding-like protein 3 
 tae-r.2   123136213   squamosa promoter-binding-like protein 3 
 hvu-r.1   123404443   squamosa promoter-binding-like protein 3 
 sbi-r.1   8065582   squamosa promoter-binding-like protein 12 
 sbi-r.1   8069951   squamosa promoter-binding-like protein 3 
 bdi-r.1   100827905   squamosa promoter-binding-like protein 3 

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Top 50 coexpressed genes to SPL2 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPL2 (ath-m.4.tis coexpression data)

CoexMap"834345"


athSPL2 | Entrez gene ID : 834345      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 2 3 1 2 2 3 2 3 2 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090356 [list] [network] negative regulation of auxin metabolic process  (4 genes)  IMP  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0048653 [list] [network] anther development  (81 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_199141.1 [sequence] [blastp]
NP_851122.1 [sequence] [blastp]
NP_974875.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_199141.1)
nucl 10  (predict for NP_851122.1)
nucl 10  (predict for NP_974875.1)
Subcellular
localization
TargetP
other 7  (predict for NP_199141.1)
other 7  (predict for NP_851122.1)
other 7  (predict for NP_974875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
SPL2
ath-u.5
for
SPL2
ath-r.7
for
SPL2
ath-m.9
for
SPL2
ath-e.2
for
SPL2
ath-m.4.bio
for
SPL2
ath-m.4.hor
for
SPL2
ath-m.4.lig
for
SPL2
ath-m.4.str
for
SPL2
bra-r.6
for
103839253
bra-r.6
for
103827978
bna-r.1
for
106447058
bna-r.1
for
106366623
bna-r.1
for
106349550
ghi-r.1
for
107916524
ghi-r.1
for
107933376
ghi-r.1
for
107898614
cit-r.1
for
102611597
gma-u.5
for
100796013
gma-u.5
for
100781289
vvi-u.5
for
100246757
vvi-u.5
for
100254075
ppo-u.5
for
7482783
ppo-u.5
for
18107887
ppo-u.5
for
7481229
mtr-u.5
for
11441057
sly-u.5
for
101246055
sly-u.5
for
101245642
sot-r.1
for
102588591
sot-r.1
for
102605918
nta-r.1
for
107822648
nta-r.1
for
107785188
nta-r.1
for
107781982
osa-u.5
for
4341986
osa-u.5
for
9270639
zma-u.5
for
sbp20
zma-u.5
for
sbp25
zma-u.5
for
sbp27
tae-r.2
for
123132182
tae-r.2
for
123136213
hvu-r.1
for
123404443
sbi-r.1
for
8065582
sbi-r.1
for
8069951
bdi-r.1
for
100827905


Ortholog ID: 4135
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi vvi ppo ppo ppo sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu sbi sbi bdi
Symbol SPL2 LOC103839253 LOC103827978 LOC106447058 LOC106366623 LOC106358415 LOC107933376 LOC107886472 LOC107922243 LOC102611597 LOC100796013 LOC100781289 LOC100246757 LOC100254075 LOC7482783 LOC18107887 LOC7481229 LOC101246055 LOC101245642 LOC102588591 LOC102605918 LOC107822648 LOC107781982 LOC107824419 LOC4341986 LOC9270639 sbp20 sbp25 sbp27 LOC123132182 LOC123136213 LOC123404443 LOC8065582 LOC8069951 LOC100827905
Function* squamosa promoter binding protein-like 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 12-like squamosa promoter-binding-like protein 12 promoter-binding protein SPL10 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 SBP-transcription factor 20 SBP-transcription factor 25 SBP-transcription factor 27 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834345 103839253 103827978 106447058 106366623 106358415 107933376 107886472 107922243 102611597 100796013 100781289 100246757 100254075 7482783 18107887 7481229 101246055 101245642 102588591 102605918 107822648 107781982 107824419 4341986 9270639 100382490 100283160 100279234 123132182 123136213 123404443 8065582 8069951 100827905
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