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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106349550  squamosa promoter-binding-like protein 2 
 bna-r.1  106447058  squamosa promoter-binding-like protein 2 
 bna-r.1  106366623  squamosa promoter-binding-like protein 2 
 bna-r.1  106358415  squamosa promoter-binding-like protein 2 
 bra-r.6  103827978  squamosa promoter-binding-like protein 2 
 bra-r.6  103839253  squamosa promoter-binding-like protein 2 
 ath-u.5  SPL2  squamosa promoter binding protein-like 2 
 ghi-r.1  107933376  squamosa promoter-binding-like protein 2 
 ghi-r.1  107916524  squamosa promoter-binding-like protein 2 
 ghi-r.1  107909863  squamosa promoter-binding-like protein 2 
 cit-r.1  102611597  squamosa promoter-binding-like protein 2 
 gma-u.5  100781289  squamosa promoter-binding-like protein 12 
 gma-u.5  100796013  squamosa promoter-binding-like protein 12-like 
 vvi-u.5  100246757  promoter-binding protein SPL10 
 vvi-u.5  100254075  squamosa promoter-binding-like protein 2 
 ppo-u.5  7482783  squamosa promoter-binding-like protein 2 
 ppo-u.5  18107887  squamosa promoter-binding-like protein 12 
 ppo-u.5  7481229  squamosa promoter-binding-like protein 2 
 mtr-u.5  11441057  squamosa promoter-binding-like protein 12 
 sly-u.5  101245642  squamosa promoter-binding-like protein 3 
 sly-u.5  101246055  squamosa promoter-binding-like protein 12 
 sot-r.1  102588591  squamosa promoter-binding-like protein 12 
 sot-r.1  102605918  squamosa promoter-binding-like protein 12 
 nta-r.1  107781982  squamosa promoter-binding-like protein 2 
 nta-r.1  107822648  squamosa promoter-binding-like protein 3 
 nta-r.1  107785188  squamosa promoter-binding-like protein 12 
 osa-u.5  4341986  squamosa promoter-binding-like protein 12 
 osa-u.5  9270639  squamosa promoter-binding-like protein 3 
 zma-u.5  sbp20  SBP-transcription factor 20 
 zma-u.5  sbp25  SBP-transcription factor 25 
 zma-u.5  sbp27  SBP-transcription factor 27 
 tae-r.2  123136213  squamosa promoter-binding-like protein 3 
 tae-r.2  123132182  squamosa promoter-binding-like protein 3 
 hvu-r.1  123404443  squamosa promoter-binding-like protein 3 
 sbi-r.1  8065582  squamosa promoter-binding-like protein 12 
 sbi-r.1  8069951  squamosa promoter-binding-like protein 3 
 bdi-r.1  100827905  squamosa promoter-binding-like protein 3 

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Top 50 coexpressed genes to 106349550 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106349550 (bna-r.1 coexpression data)

CoexMap"106349550"


bnaLOC106349550 | Entrez gene ID : 106349550
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 2 3 1 2 2 3 2 3 2 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013644998.1 [sequence] [blastp]
XP_013644999.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk_nucl 2,  mito 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for XP_013644998.1)
nucl 10  (predict for XP_013644999.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013644998.1)
other 7  (predict for XP_013644999.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106349550


bna-r.1
for
106447058


bna-r.1
for
106366623


bna-r.1
for
106358415


bra-r.6
for
103827978


bra-r.6
for
103839253


ath-u.5
for
SPL2


ghi-r.1
for
107933376


ghi-r.1
for
107916524


ghi-r.1
for
107909863


cit-r.1
for
102611597


gma-u.5
for
100781289


gma-u.5
for
100796013


vvi-u.5
for
100246757


vvi-u.5
for
100254075


ppo-u.5
for
7482783


ppo-u.5
for
18107887


ppo-u.5
for
7481229


mtr-u.5
for
11441057


sly-u.5
for
101245642


sly-u.5
for
101246055


sot-r.1
for
102588591


sot-r.1
for
102605918


nta-r.1
for
107781982


nta-r.1
for
107822648


nta-r.1
for
107785188


osa-u.5
for
4341986


osa-u.5
for
9270639


zma-u.5
for
sbp20


zma-u.5
for
sbp25


zma-u.5
for
sbp27


tae-r.2
for
123136213


tae-r.2
for
123132182


hvu-r.1
for
123404443


sbi-r.1
for
8065582


sbi-r.1
for
8069951


bdi-r.1
for
100827905



Ortholog ID: 4135
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi vvi ppo ppo ppo sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu sbi sbi bdi
Symbol LOC106447058 LOC106366623 LOC106358415 LOC103827978 LOC103839253 SPL2 LOC107933376 LOC107886472 LOC107922243 LOC102611597 LOC100781289 LOC100796013 LOC100246757 LOC100254075 LOC7482783 LOC18107887 LOC7481229 LOC101245642 LOC101246055 LOC102588591 LOC102605918 LOC107781982 LOC107822648 LOC107824419 LOC4341986 LOC9270639 sbp20 sbp25 sbp27 LOC123136213 LOC123132182 LOC123404443 LOC8065582 LOC8069951 LOC100827905
Function* squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter binding protein-like 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 12-like promoter-binding protein SPL10 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 SBP-transcription factor 20 SBP-transcription factor 25 SBP-transcription factor 27 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106447058 106366623 106358415 103827978 103839253 834345 107933376 107886472 107922243 102611597 100781289 100796013 100246757 100254075 7482783 18107887 7481229 101245642 101246055 102588591 102605918 107781982 107822648 107824419 4341986 9270639 100382490 100283160 100279234 123136213 123132182 123404443 8065582 8069951 100827905
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