ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.4.tis	AT1G60460	uncharacterized protein
ath-m.9	AT1G60460	uncharacterized protein
ath-m.4.bio	AT1G60460	uncharacterized protein
ath-m.4.hor	AT1G60460	uncharacterized protein
ath-m.4.lig	AT1G60460	uncharacterized protein
ath-m.4.str	AT1G60460	uncharacterized protein
bra-r.6	103829835	type 2 DNA topoisomerase 6 subunit B-like
bna-r.1	106376763	type 2 DNA topoisomerase 6 subunit B-like
bna-r.1	106449983	type 2 DNA topoisomerase 6 subunit B-like
ghi-r.1	107962857	type 2 DNA topoisomerase 6 subunit B-like
ghi-r.1	107901481	type 2 DNA topoisomerase 6 subunit B-like
vvi-u.5	100267199	type 2 DNA topoisomerase 6 subunit B-like
mtr-u.5	11413525	type 2 DNA topoisomerase 6 subunit B-like
sot-r.1	102594585	uncharacterized LOC102594585
nta-r.1	107828584	type 2 DNA topoisomerase 6 subunit B-like
nta-r.1	107787609	type 2 DNA topoisomerase 6 subunit B-like
osa-u.5	4342019	type 2 DNA topoisomerase 6 subunit B-like
zma-u.5	103626426	Type 2 DNA topoisomerase 6 subunit B-like
tae-r.2	123164451	type 2 DNA topoisomerase 6 subunit B-like
tae-r.2	123156564	type 2 DNA topoisomerase 6 subunit B-like
tae-r.2	123148545	type 2 DNA topoisomerase 6 subunit B-like
hvu-r.1	123413172	type 2 DNA topoisomerase 6 subunit B-like
sbi-r.1	8065600	type 2 DNA topoisomerase 6 subunit B-like
bdi-r.1	100827557	type 2 DNA topoisomerase 6 subunit B-like

Annotation

functional annotation

KEGG

GO BP

GO:0048314 [list] [network] embryo sac morphogenesis	(3 genes)	IMP
GO:0042138 [list] [network] meiotic DNA double-strand break formation	(7 genes)	IEA IMP
GO:0048235 [list] [network] pollen sperm cell differentiation	(35 genes)	IMP
GO:0007131 [list] [network] reciprocal meiotic recombination	(44 genes)	IMP
GO:0065003 [list] [network] protein-containing complex assembly	(254 genes)	IDA

GO CC

GO:0000793 [list] [network] condensed chromosome	(43 genes)	IMP
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14000 genes)	IDA

GO MF

GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	(10 genes)	TAS
GO:0030674 [list] [network] protein-macromolecule adaptor activity	(163 genes)	IPI
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_001031210.1 [sequence] [blastp]
NP_001031211.1 [sequence] [blastp]
NP_001320533.1 [sequence] [blastp]
NP_001320534.1 [sequence] [blastp]
NP_176249.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 1, cysk_nucl 1, cyto 1, mito 1, plas 1, extr 1, vacu 1, mito_plas 1, cyto_plas 1	(predict for NP_001031210.1)
chlo 6, nucl 1, cyto 1, plas 1, extr 1, vacu 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001031211.1)
cyto 4, nucl 2, E.R. 2, cyto_pero 2	(predict for NP_001320533.1)
nucl 6, plas 1, mito_plas 1, chlo 1, vacu 1, E.R. 1, E.R._vacu 1	(predict for NP_001320534.1)
chlo 6, nucl 1, cysk_nucl 1, cyto 1, plas 1, extr 1, vacu 1, cyto_plas 1	(predict for NP_176249.2)

Subcellular
localization
TargetP

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT1G60460	ath-m.9 for AT1G60460	ath-m.4.bio for AT1G60460	ath-m.4.hor for AT1G60460	ath-m.4.lig for AT1G60460	ath-m.4.str for AT1G60460	bra-r.6 for 103829835	bna-r.1 for 106376763	bna-r.1 for 106449983	ghi-r.1 for 107962857	ghi-r.1 for 107901481	vvi-u.5 for 100267199	mtr-u.5 for 11413525	sot-r.1 for 102594585	nta-r.1 for 107828584	nta-r.1 for 107787609	osa-u.5 for 4342019	zma-u.5 for 103626426	tae-r.2 for 123164451	tae-r.2 for 123156564	tae-r.2 for 123148545	hvu-r.1 for 123413172	sbi-r.1 for 8065600	bdi-r.1 for 100827557