Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   BBX28   B-box type zinc finger family protein 
 ath-u.5   BBX28   B-box type zinc finger family protein 
 ath-e.2   BBX28   B-box type zinc finger family protein 
 ath-u.5   BBX31   B-box type zinc finger family protein 
 ath-u.5   BBX29   B-box type zinc finger family protein 
 ath-u.5   BBX30   B-box type zinc finger family protein 
 bra-r.6   103834812   zinc finger protein CONSTANS-LIKE 1 
 bra-r.6   103867022   zinc finger protein HD1 
 bra-r.6   103871011   B-box domain protein 30 
 bna-r.1   106374860   B-box domain protein 31 
 ghi-r.1   107903524   zinc finger protein CONSTANS-LIKE 1 
 ghi-r.1   107902070   zinc finger protein CONSTANS-LIKE 2 
 ghi-r.1   107894154   zinc finger protein CONSTANS-LIKE 1 
 cit-r.1   102620746   uncharacterized LOC102620746 
 cit-r.1   102612309   protein SOB FIVE-LIKE 2 
 gma-u.5   100805832   B-box domain protein 31 
 gma-u.5   100801024   zinc finger protein CONSTANS-LIKE 1 
 gma-u.5   100789532   B-box zinc finger protein 32 
 vvi-u.5   100264749   zinc finger protein CONSTANS 
 vvi-u.5   100252747   putative zinc finger protein At1g68190 
 vvi-u.5   100246896   zinc finger protein CONSTANS-LIKE 4 
 ppo-u.5   7460864   B-box zinc finger protein 24 
 ppo-u.5   18095672   zinc finger protein CONSTANS-LIKE 4 
 mtr-u.5   11417549   zinc finger protein CONSTANS-LIKE 4 
 sly-u.5   101246984   zinc finger protein CONSTANS-LIKE 2 
 sly-u.5   101247540   B-box domain protein 30 
 sly-u.5   101265452   zinc finger protein CONSTANS-LIKE 4 
 sot-r.1   102585275   B-box zinc finger protein 21-like 
 sot-r.1   102586344   uncharacterized LOC102586344 
 sot-r.1   102587352   zinc finger protein CONSTANS-like 
 nta-r.1   107820983   uncharacterized LOC107820983 
 nta-r.1   107762308   uncharacterized LOC107762308 
 nta-r.1   107767469   uncharacterized LOC107767469 
 osa-u.5   107278220   B-box zinc finger protein 32 
 osa-u.5   4328476   B-box zinc finger protein 32 
 osa-u.5   4344813   uncharacterized LOC4344813 
 zma-u.5   100281114   B-box zinc finger family protein 
 zma-u.5   109946110   B-box zinc finger protein 32-like 
 zma-u.5   109943107   zinc finger protein CONSTANS 
 hvu-r.1   123398146   B-box zinc finger protein 32-like 
 hvu-r.1   123402306   B-box zinc finger protein 32-like 
 hvu-r.1   123410424   B-box zinc finger protein 32-like 
 sbi-r.1   8077202   B-box zinc finger protein 32 
 sbi-r.1   8061571   B-box zinc finger protein 32 
 sbi-r.1   8080907   ATPase family AAA domain-containing protein 2 
 bdi-r.1   100827682   B-box zinc finger protein 32 
 bdi-r.1   100830331   zinc finger protein CONSTANS-LIKE 4 
 cre-r.1   CHLRE_06g278200v5   uncharacterized protein 

close


Top 50 coexpressed genes to BBX28 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to BBX28 (ath-r.7 coexpression data)

CoexMap"828839"


athBBX28 | Entrez gene ID : 828839      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 6 3 1 3 2 3 3 2 1 3 3 3 3 3 3 3 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (16 genes)  IMP  
GO:0090351 [list] [network] seedling development  (137 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0061629 [list] [network] RNA polymerase II-specific DNA-binding transcription factor binding  (2 genes)  IPI  
GO:0003712 [list] [network] transcription coregulator activity  (77 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_194461.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_194461.1)
Subcellular
localization
TargetP
other 8  (predict for NP_194461.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
BBX28
ath-u.5
for
BBX28
ath-e.2
for
BBX28
ath-u.5
for
BBX31
ath-u.5
for
BBX29
ath-u.5
for
BBX30
bra-r.6
for
103834812
bra-r.6
for
103867022
bra-r.6
for
103871011
bna-r.1
for
106374860
ghi-r.1
for
107903524
ghi-r.1
for
107902070
ghi-r.1
for
107894154
cit-r.1
for
102620746
cit-r.1
for
102612309
gma-u.5
for
100805832
gma-u.5
for
100801024
gma-u.5
for
100789532
vvi-u.5
for
100264749
vvi-u.5
for
100252747
vvi-u.5
for
100246896
ppo-u.5
for
7460864
ppo-u.5
for
18095672
mtr-u.5
for
11417549
sly-u.5
for
101246984
sly-u.5
for
101247540
sly-u.5
for
101265452
sot-r.1
for
102585275
sot-r.1
for
102586344
sot-r.1
for
102587352
nta-r.1
for
107820983
nta-r.1
for
107762308
nta-r.1
for
107767469
osa-u.5
for
107278220
osa-u.5
for
4328476
osa-u.5
for
4344813
zma-u.5
for
100281114
zma-u.5
for
109946110
zma-u.5
for
109943107
hvu-r.1
for
123398146
hvu-r.1
for
123402306
hvu-r.1
for
123410424
sbi-r.1
for
8077202
sbi-r.1
for
8061571
sbi-r.1
for
8080907
bdi-r.1
for
100827682
bdi-r.1
for
100830331
cre-r.1
for
CHLRE_06g278200v5


Ortholog ID: 710
Species ath ath ath bra bra bra bna bna ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol BBX28 BBX29 BBX30 LOC103871011 LOC103844901 LOC103834947 LOC106412037 LOC111202874 LOC107903524 LOC107948631 LOC102620746 LOC102612309 LOC100801024 LOC100789532 LOC100809520 LOC100264749 LOC100252747 LOC104880899 LOC7460864 LOC18095672 LOC11417549 LOC101246984 LOC101265452 LOC104649503 LOC102585275 LOC102600093 LOC102603949 LOC107762308 LOC107779164 LOC107795590 LOC107278220 LOC4328476 LOC4344813 LOC100281114 LOC109943107 LOC103629679 LOC123398146 LOC123402306 LOC123410424 LOC8077202 LOC8061571 LOC8080907 LOC100827682 LOC100830331 CHLRE_06g278200v5
Function* B-box type zinc finger family protein B-box type zinc finger family protein B-box type zinc finger family protein B-box domain protein 30 putative zinc finger protein CONSTANS-LIKE 11 B-box domain protein 31 zinc finger protein CONSTANS-LIKE 1-like zinc finger protein CONSTANS-LIKE 1 zinc finger protein CONSTANS-LIKE 1 zinc finger protein CONSTANS-LIKE 1 uncharacterized LOC102620746 protein SOB FIVE-LIKE 2 zinc finger protein CONSTANS-LIKE 1 B-box zinc finger protein 32 zinc finger protein CONSTANS-LIKE 3 zinc finger protein CONSTANS putative zinc finger protein At1g68190 B-box domain protein 30 B-box zinc finger protein 24 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 4 zinc finger protein HD1-like B-box zinc finger protein 21-like zinc finger protein CONSTANS-LIKE 3-like SAGA-associated factor 73-like uncharacterized LOC107762308 B-box domain protein 30-like uncharacterized LOC107795590 B-box zinc finger protein 32 B-box zinc finger protein 32 uncharacterized LOC4344813 B-box zinc finger family protein zinc finger protein CONSTANS Putative B-box type zinc finger family protein B-box zinc finger protein 32-like B-box zinc finger protein 32-like B-box zinc finger protein 32-like B-box zinc finger protein 32 B-box zinc finger protein 32 ATPase family AAA domain-containing protein 2 B-box zinc finger protein 32 zinc finger protein CONSTANS-LIKE 4 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
bra04075 Plant hormone signal transduction 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 3
bna00650 Butanoate metabolism 3
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00270 Cysteine and methionine metabolism 2
sbi00543 Exopolysaccharide biosynthesis 2
sbi00920 Sulfur metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828839 835535 3769879 103871011 103844901 103834947 106412037 111202874 107903524 107948631 102620746 102612309 100801024 100789532 100809520 100264749 100252747 104880899 7460864 18095672 11417549 101246984 101265452 104649503 102585275 102600093 102603949 107762308 107779164 107795590 107278220 4328476 4344813 100281114 109943107 103629679 123398146 123402306 123410424 8077202 8061571 8080907 100827682 100830331 66053705
The preparation time of this page was 0.3 [sec].