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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G04120   Phosphoglycerate mutase family protein 
 ath-u.5   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.9   AT5G04120   Phosphoglycerate mutase family protein 
 ath-e.2   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.4.bio   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.4.hor   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.4.lig   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.4.str   AT5G04120   Phosphoglycerate mutase family protein 
 ath-m.4.tis   AT5G04120   Phosphoglycerate mutase family protein 
 ath-u.5   AT3G50520   Phosphoglycerate mutase family protein 
 bra-r.6   103828089   phosphoglycerate mutase-like protein 4 
 bna-r.1   106369988   metal-independent phosphoserine phosphatase-like 
 bna-r.1   106423724   metal-independent phosphoserine phosphatase-like 
 ghi-r.1   107913202   phosphoglycerate mutase-like protein 4 
 ghi-r.1   107897819   phosphoglycerate mutase-like protein 4 
 cit-r.1   102607389   phosphoglycerate mutase-like protein 4 
 gma-u.5   100804369   probable phosphoglycerate mutase gpmB-like 
 gma-u.5   100802260   phosphoglycerate mutase-like protein 4 
 vvi-u.5   100853988   phosphoglycerate mutase-like protein 4 
 ppo-u.5   7477959   phosphoglycerate mutase-like protein 4 
 mtr-u.5   11406747   phosphoglycerate mutase-like protein 4 
 mtr-u.5   11417969   phosphoglycerate mutase-like protein 4 
 sly-u.5   101265096   phosphoglycerate mutase-like protein 4 
 sot-r.1   102592733   phosphoglycerate mutase-like protein 4 
 nta-r.1   107763739   phosphoglycerate mutase-like protein 4 
 nta-r.1   107761213   phosphoglycerate mutase-like protein 4 
 nta-r.1   107803360   phosphoglycerate mutase-like protein 4 
 osa-u.5   9270925   phosphoglycerate mutase-like protein 4 
 osa-u.5   4349723   phosphoglycerate mutase-like protein 4 
 zma-u.5   100381976   Pentatricopeptide repeat-containing protein 
 zma-u.5   100284555   phosphoglycerate mutase gpmB 
 tae-r.2   123143747   phosphoglycerate mutase-like protein 4 
 tae-r.2   123136245   phosphoglycerate mutase-like protein 4 
 tae-r.2   123132210   phosphoglycerate mutase-like protein 4 
 hvu-r.1   123403679   phosphoglycerate mutase-like protein 4 
 hvu-r.1   123395216   phosphoglycerate mutase-like protein 4 
 sbi-r.1   8085617   phosphoglycerate mutase-like protein 4 
 sbi-r.1   8083557   phosphoglycerate mutase-like protein 4 
 sbi-r.1   8085618   phosphoglycerate mutase-like protein 4 
 bdi-r.1   100830961   phosphoglycerate mutase-like protein 4 
 cre-r.1   CHLRE_10g460300v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G04120 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04120 (ath-r.7 coexpression data)

CoexMap"830290"


athAT5G04120 | Entrez gene ID : 830290      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 2 1 1 2 1 1 3 2 2 3 2 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070179 [list] [network] D-serine biosynthetic process  (1 genes)  IDA  
GO:0006564 [list] [network] L-serine biosynthetic process  (6 genes)  IDA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0036424 [list] [network] L-phosphoserine phosphatase activity  (2 genes)  IDA  
Protein NP_196032.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_196032.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G04120
ath-u.5
for
AT5G04120
ath-m.9
for
AT5G04120
ath-e.2
for
AT5G04120
ath-m.4.bio
for
AT5G04120
ath-m.4.hor
for
AT5G04120
ath-m.4.lig
for
AT5G04120
ath-m.4.str
for
AT5G04120
ath-m.4.tis
for
AT5G04120
ath-u.5
for
AT3G50520
bra-r.6
for
103828089
bna-r.1
for
106369988
bna-r.1
for
106423724
ghi-r.1
for
107913202
ghi-r.1
for
107897819
cit-r.1
for
102607389
gma-u.5
for
100804369
gma-u.5
for
100802260
vvi-u.5
for
100853988
ppo-u.5
for
7477959
mtr-u.5
for
11406747
mtr-u.5
for
11417969
sly-u.5
for
101265096
sot-r.1
for
102592733
nta-r.1
for
107763739
nta-r.1
for
107761213
nta-r.1
for
107803360
osa-u.5
for
9270925
osa-u.5
for
4349723
zma-u.5
for
100381976
zma-u.5
for
100284555
tae-r.2
for
123143747
tae-r.2
for
123136245
tae-r.2
for
123132210
hvu-r.1
for
123403679
hvu-r.1
for
123395216
sbi-r.1
for
8085617
sbi-r.1
for
8083557
sbi-r.1
for
8085618
bdi-r.1
for
100830961
cre-r.1
for
CHLRE_10g460300v5


Ortholog ID: 3467
Species ath ath bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi cre
Symbol AT5G04120 AT3G50520 LOC103828089 LOC106423724 LOC106370749 LOC107913202 LOC107897819 LOC102607389 LOC100804369 LOC100802260 LOC100853988 LOC7477959 LOC11406747 LOC11417969 LOC101265096 LOC102592733 LOC107763739 LOC107761213 LOC107803360 LOC4349723 LOC107276373 LOC100381976 LOC100284555 LOC123143747 LOC123132210 LOC123106844 LOC123403679 LOC123395216 LOC8085617 LOC8083557 LOC8085618 LOC100830961 CHLRE_10g460300v5
Function* Phosphoglycerate mutase family protein Phosphoglycerate mutase family protein phosphoglycerate mutase-like protein 4 metal-independent phosphoserine phosphatase-like metal-independent phosphoserine phosphatase-like phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 probable phosphoglycerate mutase gpmB-like phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 Pentatricopeptide repeat-containing protein phosphoglycerate mutase gpmB phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna00260 Glycine, serine and threonine metabolism 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna00260 Glycine, serine and threonine metabolism 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04144 Endocytosis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04144 Endocytosis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma01230 Biosynthesis of amino acids 3
gma00260 Glycine, serine and threonine metabolism 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00052 Galactose metabolism 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00260 Glycine, serine and threonine metabolism 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00561 Glycerolipid metabolism 2
sly00310 Lysine degradation 2
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01200 Carbon metabolism 4
sot00470 D-Amino acid metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03010 Ribosome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae01200 Carbon metabolism 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu01250 Biosynthesis of nucleotide sugars 3
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi00564 Glycerophospholipid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830290 824216 103828089 106423724 106370749 107913202 107897819 102607389 100804369 100802260 100853988 7477959 11406747 11417969 101265096 102592733 107763739 107761213 107803360 4349723 107276373 100381976 100284555 123143747 123132210 123106844 123403679 123395216 8085617 8083557 8085618 100830961 5724149
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