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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-u.5   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.9   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-e.2   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.4.bio   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.4.hor   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.4.lig   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.4.str   SOS4   pfkB-like carbohydrate kinase family protein 
 ath-m.4.tis   SOS4   pfkB-like carbohydrate kinase family protein 
 bra-r.6   103863760   pyridoxal kinase 
 bna-r.1   106441228   pyridoxal kinase 
 bna-r.1   106445882   pyridoxal kinase 
 ghi-r.1   107912709   pyridoxal kinase 
 ghi-r.1   107916660   pyridoxal kinase 
 cit-r.1   102609879   pyridoxal kinase 
 gma-u.5   732558   pyridoxal kinase 
 gma-u.5   100811288   pyridoxal kinase 
 vvi-u.5   100251978   pyridoxal kinase 
 ppo-u.5   18106645   pyridoxal kinase 
 mtr-u.5   11430124   pyridoxal kinase 
 sly-u.5   101259693   pyridoxal kinase 
 sot-r.1   102597669   pyridoxal kinase-like 
 nta-r.1   107793750   pyridoxal kinase 
 nta-r.1   107781750   pyridoxal kinase 
 osa-u.5   4352717   pyridoxal kinase 
 zma-u.5   100283562   pyridoxal kinase 
 tae-r.2   123110491   pyridoxal kinase 
 tae-r.2   123119489   pyridoxal kinase 
 tae-r.2   543378   pyridoxal kinase 
 hvu-r.1   123452885   pyridoxal kinase 
 sbi-r.1   110429921   pyridoxal kinase 
 bdi-r.1   100842691   pyridoxal kinase 
 cre-r.1   CHLRE_03g173800v5   uncharacterized protein 

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Top 50 coexpressed genes to SOS4 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SOS4 (ath-r.7 coexpression data)

CoexMap"833763"


athSOS4 | Entrez gene ID : 833763      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00750 [list] [network] Vitamin B6 metabolism (15 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0008615 [list] [network] pyridoxine biosynthetic process  (2 genes)  TAS  
GO:0009443 [list] [network] pyridoxal 5'-phosphate salvage  (2 genes)  IDA  
GO:0042538 [list] [network] hyperosmotic salinity response  (57 genes)  IMP  
GO:0010054 [list] [network] trichoblast differentiation  (135 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0008478 [list] [network] pyridoxal kinase activity  (1 genes)  IDA IGI  
Protein NP_001078677.1 [sequence] [blastp]
NP_001190432.1 [sequence] [blastp]
NP_001331291.1 [sequence] [blastp]
NP_198601.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 1,  vacu 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001078677.1)
chlo 6,  mito 2,  vacu 1,  E.R. 1,  cysk_nucl 1,  E.R._vacu 1  (predict for NP_001190432.1)
chlo 5,  extr 1,  vacu 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001331291.1)
chlo 6,  mito 2,  vacu 1,  E.R. 1,  cysk_nucl 1,  E.R._vacu 1  (predict for NP_198601.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001078677.1)
chlo 9  (predict for NP_001190432.1)
other 6  (predict for NP_001331291.1)
chlo 9  (predict for NP_198601.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
SOS4
ath-u.5
for
SOS4
ath-m.9
for
SOS4
ath-e.2
for
SOS4
ath-m.4.bio
for
SOS4
ath-m.4.hor
for
SOS4
ath-m.4.lig
for
SOS4
ath-m.4.str
for
SOS4
ath-m.4.tis
for
SOS4
bra-r.6
for
103863760
bna-r.1
for
106441228
bna-r.1
for
106445882
ghi-r.1
for
107912709
ghi-r.1
for
107916660
cit-r.1
for
102609879
gma-u.5
for
732558
gma-u.5
for
100811288
vvi-u.5
for
100251978
ppo-u.5
for
18106645
mtr-u.5
for
11430124
sly-u.5
for
101259693
sot-r.1
for
102597669
nta-r.1
for
107793750
nta-r.1
for
107781750
osa-u.5
for
4352717
zma-u.5
for
100283562
tae-r.2
for
123110491
tae-r.2
for
123119489
tae-r.2
for
543378
hvu-r.1
for
123452885
sbi-r.1
for
110429921
bdi-r.1
for
100842691
cre-r.1
for
CHLRE_03g173800v5


Ortholog ID: 10338
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol SOS4 LOC103863760 LOC106441228 LOC106445882 LOC107912709 LOC107916660 LOC102609879 LOC732558 LOC100811288 LOC100251978 LOC18106645 LOC11430124 LOC101259693 LOC102597669 LOC107793750 LOC107781750 LOC4352717 LOC100283562 LOC123110491 LOC123119489 LOC543378 LOC123452885 LOC110429921 LOC100842691 CHLRE_03g173800v5
Function* pfkB-like carbohydrate kinase family protein pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase-like pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase pyridoxal kinase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 5
ath00270 Cysteine and methionine metabolism 5
ath01240 Biosynthesis of cofactors 3
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 6
gma01200 Carbon metabolism 6
gma01240 Biosynthesis of cofactors 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04016 MAPK signaling pathway - plant 3
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 4
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 9
tae00071 Fatty acid degradation 4
tae01212 Fatty acid metabolism 4
tae04146 Peroxisome 4
tae00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 9
tae00071 Fatty acid degradation 4
tae01212 Fatty acid metabolism 4
tae04146 Peroxisome 4
tae00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 7
tae00071 Fatty acid degradation 6
tae01212 Fatty acid metabolism 6
tae04146 Peroxisome 6
tae00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu03083 Polycomb repressive complex 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bdi01230 Biosynthesis of amino acids 3
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833763 103863760 106441228 106445882 107912709 107916660 102609879 732558 100811288 100251978 18106645 11430124 101259693 102597669 107793750 107781750 4352717 100283562 123110491 123119489 543378 123452885 110429921 100842691 5728891
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