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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G45360   F-box family protein 
 ath-u.5   AT5G45360   F-box family protein 
 ath-m.9   AT5G45360   F-box family protein 
 ath-e.2   AT5G45360   F-box family protein 
 ath-m.4.bio   AT5G45360   F-box family protein 
 ath-m.4.hor   AT5G45360   F-box family protein 
 ath-m.4.lig   AT5G45360   F-box family protein 
 ath-m.4.str   AT5G45360   F-box family protein 
 ath-m.4.tis   AT5G45360   F-box family protein 
 bra-r.6   103827803   F-box protein SKIP31 
 bra-r.6   103839127   F-box protein SKIP31 
 bna-r.1   106381257   F-box protein SKIP31 
 bna-r.1   106427446   F-box protein SKIP31-like 
 bna-r.1   106416587   F-box protein SKIP31 
 ghi-r.1   107946824   F-box protein SKIP31 
 ghi-r.1   107947360   F-box protein SKIP31 
 cit-r.1   102614946   F-box protein SKIP31 
 gma-u.5   100796362   F-box protein SKIP31 
 gma-u.5   100778591   F-box protein SKIP31 
 vvi-u.5   100259709   F-box protein SKIP31 
 ppo-u.5   18098432   F-box protein SKIP31 
 mtr-u.5   11408619   F-box protein SKIP31 
 sly-u.5   101253817   F-box protein SKIP31 
 sot-r.1   102578485   F-box protein SKIP31-like 
 sot-r.1   102599876   F-box protein SKIP31-like 
 nta-r.1   107806473   F-box protein SKIP31 
 nta-r.1   107804919   F-box protein SKIP31-like 
 nta-r.1   107760630   F-box protein SKIP31 
 osa-u.5   4342027   F-box protein SKIP31 
 zma-u.5   100284270   uncharacterized LOC100284270 
 tae-r.2   123157408   F-box protein SKIP31 
 tae-r.2   123148524   F-box protein SKIP31 
 tae-r.2   123165855   F-box protein SKIP31 
 hvu-r.1   123407710   F-box protein SKIP31 
 sbi-r.1   110431307   F-box protein SKIP31 
 bdi-r.1   100829575   F-box protein SKIP31 
 cre-r.1   CHLRE_01g021200v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G45360 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G45360 (ath-r.7 coexpression data)

CoexMap"834572"


athAT5G45360 | Entrez gene ID : 834572      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IDA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_568643.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  chlo 1,  cyto 1,  cysk_plas 1  (predict for NP_568643.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568643.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G45360
ath-u.5
for
AT5G45360
ath-m.9
for
AT5G45360
ath-e.2
for
AT5G45360
ath-m.4.bio
for
AT5G45360
ath-m.4.hor
for
AT5G45360
ath-m.4.lig
for
AT5G45360
ath-m.4.str
for
AT5G45360
ath-m.4.tis
for
AT5G45360
bra-r.6
for
103827803
bra-r.6
for
103839127
bna-r.1
for
106381257
bna-r.1
for
106427446
bna-r.1
for
106416587
ghi-r.1
for
107946824
ghi-r.1
for
107947360
cit-r.1
for
102614946
gma-u.5
for
100796362
gma-u.5
for
100778591
vvi-u.5
for
100259709
ppo-u.5
for
18098432
mtr-u.5
for
11408619
sly-u.5
for
101253817
sot-r.1
for
102578485
sot-r.1
for
102599876
nta-r.1
for
107806473
nta-r.1
for
107804919
nta-r.1
for
107760630
osa-u.5
for
4342027
zma-u.5
for
100284270
tae-r.2
for
123157408
tae-r.2
for
123148524
tae-r.2
for
123165855
hvu-r.1
for
123407710
sbi-r.1
for
110431307
bdi-r.1
for
100829575
cre-r.1
for
CHLRE_01g021200v5


Ortholog ID: 7365
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G45360 LOC103827803 LOC103839127 LOC106381257 LOC106427446 LOC106416587 LOC107946824 LOC107947360 LOC102614946 LOC100796362 LOC100778591 LOC100259709 LOC18098432 LOC11408619 LOC101253817 LOC102578485 LOC102599876 LOC107806473 LOC107760630 LOC107824083 LOC4342027 LOC100284270 LOC123157408 LOC123148524 LOC123165855 LOC123407710 LOC110431307 LOC100829575 CHLRE_01g021200v5
Function* F-box family protein F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31-like F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31-like F-box protein SKIP31-like F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 uncharacterized LOC100284270 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04145 Phagosome 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04145 Phagosome 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04145 Phagosome 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00600 Sphingolipid metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi00600 Sphingolipid metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04144 Endocytosis 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03083 Polycomb repressive complex 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834572 103827803 103839127 106381257 106427446 106416587 107946824 107947360 102614946 100796362 100778591 100259709 18098432 11408619 101253817 102578485 102599876 107806473 107760630 107824083 4342027 100284270 123157408 123148524 123165855 123407710 110431307 100829575 5715206
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