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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100259709   F-box protein SKIP31 
 vvi-r.5   100259709   F-box protein SKIP31 
 vvi-m.5   100259709   F-box protein SKIP31 
 ath-u.5   AT5G45360   F-box family protein 
 gma-u.5   100796362   F-box protein SKIP31 
 gma-u.5   100778591   F-box protein SKIP31 
 ppo-u.5   18098432   F-box protein SKIP31 
 mtr-u.5   11408619   F-box protein SKIP31 
 sly-u.5   101253817   F-box protein SKIP31 
 osa-u.5   4342027   F-box protein SKIP31 
 zma-u.5   100284270   uncharacterized LOC100284270 

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Top 50 coexpressed genes to 100259709 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259709 (vvi-u.5 coexpression data)

CoexMap"100259709"


vviLOC100259709 | Entrez gene ID : 100259709      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002270881.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  chlo 1,  cyto 1,  cysk_plas 1  (predict for XP_002270881.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002270881.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100259709
vvi-r.5
for
100259709
vvi-m.5
for
100259709
ath-u.5
for
AT5G45360
gma-u.5
for
100796362
gma-u.5
for
100778591
ppo-u.5
for
18098432
mtr-u.5
for
11408619
sly-u.5
for
101253817
osa-u.5
for
4342027
zma-u.5
for
100284270


Ortholog ID: 7365
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna bna cit sly sot sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100259709 AT5G45360 LOC100778591 LOC100796362 LOC103827803 LOC103839127 LOC18098432 LOC11408619 LOC107946824 LOC107947360 LOC106427446 LOC106381257 LOC102614946 LOC101253817 LOC102578485 LOC102599876 LOC107806473 LOC107824083 LOC4342027 LOC100284270 LOC123165855 LOC123157408 LOC123407710 LOC110431307 LOC100829575 CHLRE_01g021200v5
Function* F-box protein SKIP31 F-box family protein F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31-like F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31-like F-box protein SKIP31-like F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 uncharacterized LOC100284270 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 F-box protein SKIP31 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04144 Endocytosis 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00600 Sphingolipid metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi00600 Sphingolipid metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04145 Phagosome 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna04145 Phagosome 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100259709 834572 100778591 100796362 103827803 103839127 18098432 11408619 107946824 107947360 106427446 106381257 102614946 101253817 102578485 102599876 107806473 107824083 4342027 100284270 123165855 123157408 123407710 110431307 100829575 5715206
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