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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-u.5   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.9   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-e.2   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.4.bio   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.4.hor   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.4.lig   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.4.str   ATGRIP   Golgi-localized GRIP domain-containing protein 
 ath-m.4.tis   ATGRIP   Golgi-localized GRIP domain-containing protein 
 bra-r.6   103837659   protein GRIP 
 bna-r.1   106366326   protein GRIP 
 bna-r.1   106392229   protein GRIP 
 ghi-r.1   107914256   protein GRIP 
 ghi-r.1   107897597   protein GRIP 
 cit-r.1   102626541   protein GRIP 
 gma-u.5   100795939   protein GRIP 
 gma-u.5   100775990   protein GRIP 
 vvi-u.5   100266353   protein GRIP 
 ppo-u.5   7492120   protein GRIP 
 mtr-u.5   11410902   protein GRIP 
 sly-u.5   101254258   protein GRIP 
 sot-r.1   102590817   protein GRIP 
 nta-r.1   107804362   protein GRIP 
 nta-r.1   107777147   protein GRIP 
 osa-u.5   4343206   protein GRIP 
 zma-u.5   103649231   protein GRIP 
 tae-r.2   123188554   protein GRIP 
 tae-r.2   123052692   protein GRIP 
 tae-r.2   123044879   protein GRIP 
 hvu-r.1   123426227   protein GRIP 
 sbi-r.1   8077277   protein GRIP 
 bdi-r.1   100839258   protein GRIP 
 cre-r.1   CHLRE_09g398808v5   uncharacterized protein 

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Top 50 coexpressed genes to ATGRIP (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATGRIP (ath-r.7 coexpression data)

CoexMap"836733"


athATGRIP | Entrez gene ID : 836733      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048193 [list] [network] Golgi vesicle transport  (76 genes)  TAS  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001332639.1 [sequence] [blastp]
NP_001332640.1 [sequence] [blastp]
NP_569025.2 [sequence] [blastp]
NP_851277.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 4,  cyto 3,  plas 2  (predict for NP_001332639.1)
nucl 4,  nucl_plas 4,  cyto 3,  plas 2  (predict for NP_001332640.1)
nucl_plas 4,  nucl 4,  cyto 3,  plas 3  (predict for NP_569025.2)
nucl 4,  nucl_plas 4,  cyto 3,  plas 2  (predict for NP_851277.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001332639.1)
other 9  (predict for NP_001332640.1)
other 9  (predict for NP_569025.2)
other 9  (predict for NP_851277.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
ATGRIP
ath-u.5
for
ATGRIP
ath-m.9
for
ATGRIP
ath-e.2
for
ATGRIP
ath-m.4.bio
for
ATGRIP
ath-m.4.hor
for
ATGRIP
ath-m.4.lig
for
ATGRIP
ath-m.4.str
for
ATGRIP
ath-m.4.tis
for
ATGRIP
bra-r.6
for
103837659
bna-r.1
for
106366326
bna-r.1
for
106392229
ghi-r.1
for
107914256
ghi-r.1
for
107897597
cit-r.1
for
102626541
gma-u.5
for
100795939
gma-u.5
for
100775990
vvi-u.5
for
100266353
ppo-u.5
for
7492120
mtr-u.5
for
11410902
sly-u.5
for
101254258
sot-r.1
for
102590817
nta-r.1
for
107804362
nta-r.1
for
107777147
osa-u.5
for
4343206
zma-u.5
for
103649231
tae-r.2
for
123188554
tae-r.2
for
123052692
tae-r.2
for
123044879
hvu-r.1
for
123426227
sbi-r.1
for
8077277
bdi-r.1
for
100839258
cre-r.1
for
CHLRE_09g398808v5


Ortholog ID: 9755
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol ATGRIP LOC103837659 LOC106366326 LOC106392229 LOC107914256 LOC107897597 LOC102626541 LOC100795939 LOC100775990 LOC100266353 LOC7492120 LOC11410902 LOC101254258 LOC102590817 LOC107804362 LOC107777147 LOC4343206 LOC103649231 LOC123188554 LOC123052692 LOC123044879 LOC123426227 LOC8077277 LOC100839258 CHLRE_09g398808v5
Function* Golgi-localized GRIP domain-containing protein protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP protein GRIP uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra04142 Lysosome 4
bra05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04144 Endocytosis 3
sot04142 Lysosome 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 4
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 4
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836733 103837659 106366326 106392229 107914256 107897597 102626541 100795939 100775990 100266353 7492120 11410902 101254258 102590817 107804362 107777147 4343206 103649231 123188554 123052692 123044879 123426227 8077277 100839258 5720380
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