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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-u.5   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.9   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-e.2   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.4.bio   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.4.hor   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.4.lig   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.4.str   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-m.4.tis   FRA3   Endonuclease/exonuclease/phosphatase family protein 
 ath-u.5   5PTase14   endonuclease/exonuclease/phosphatase family protein 
 ath-u.5   5PTase12   Endonuclease/exonuclease/phosphatase family protein 
 ath-u.5   5PTASE13   Endonuclease/exonuclease/phosphatase family protein 
 bra-r.6   103831060   type II inositol polyphosphate 5-phosphatase 15 
 bra-r.6   103836521   type I inositol polyphosphate 5-phosphatase 13 
 bna-r.1   106400297   type I inositol polyphosphate 5-phosphatase 13 
 bna-r.1   106371170   type I inositol polyphosphate 5-phosphatase 13-like 
 ghi-r.1   107933638   type I inositol polyphosphate 5-phosphatase 12 
 ghi-r.1   107920091   type II inositol polyphosphate 5-phosphatase 15 
 ghi-r.1   107895048   type II inositol polyphosphate 5-phosphatase 15 
 cit-r.1   102624548   type II inositol polyphosphate 5-phosphatase 15 
 cit-r.1   102616657   type I inositol polyphosphate 5-phosphatase 12-like 
 gma-u.5   100787864   type I inositol polyphosphate 5-phosphatase 12 
 gma-u.5   100805728   type II inositol polyphosphate 5-phosphatase 15 
 gma-u.5   100801342   type II inositol polyphosphate 5-phosphatase 15 
 vvi-u.5   100253200   type II inositol polyphosphate 5-phosphatase 15 
 vvi-u.5   100245620   type I inositol polyphosphate 5-phosphatase 12 
 ppo-u.5   7472520   type I inositol polyphosphate 5-phosphatase 12 
 ppo-u.5   7460656   type II inositol polyphosphate 5-phosphatase 15 
 mtr-u.5   25484583   type II inositol polyphosphate 5-phosphatase 15 
 sly-u.5   101253551   type II inositol polyphosphate 5-phosphatase 15 
 sly-u.5   101257789   type I inositol polyphosphate 5-phosphatase 12-like 
 sot-r.1   102601778   type I inositol polyphosphate 5-phosphatase 12-like 
 sot-r.1   102599614   type II inositol polyphosphate 5-phosphatase 15 
 sot-r.1   102597555   type I inositol polyphosphate 5-phosphatase 12-like 
 nta-r.1   107812880   type II inositol polyphosphate 5-phosphatase 15 
 nta-r.1   107827348   type I inositol polyphosphate 5-phosphatase 12 
 nta-r.1   107758925   type I inositol polyphosphate 5-phosphatase 12-like 
 osa-u.5   4346083   type I inositol polyphosphate 5-phosphatase 13 
 osa-u.5   4329359   type II inositol polyphosphate 5-phosphatase 15 
 zma-u.5   103632989   type I inositol polyphosphate 5-phosphatase 13 
 zma-u.5   103642551   type II inositol polyphosphate 5-phosphatase 15 
 zma-u.5   103647560   type I inositol polyphosphate 5-phosphatase 13 
 tae-r.2   123164738   type II inositol polyphosphate 5-phosphatase 15 
 tae-r.2   123151578   type II inositol polyphosphate 5-phosphatase 15 
 tae-r.2   123085310   type II inositol polyphosphate 5-phosphatase 15 
 hvu-r.1   123408301   type II inositol polyphosphate 5-phosphatase 15-like 
 hvu-r.1   123449131   type II inositol polyphosphate 5-phosphatase 15-like 
 sbi-r.1   8056673   type II inositol polyphosphate 5-phosphatase 15 
 sbi-r.1   8063976   type II inositol polyphosphate 5-phosphatase 15 
 bdi-r.1   100829310   type II inositol polyphosphate 5-phosphatase 15 
 bdi-r.1   100838416   type II inositol polyphosphate 5-phosphatase 15 
 bdi-r.1   100839321   type II inositol polyphosphate 5-phosphatase 15 
 cre-r.1   CHLRE_12g530050v5   uncharacterized protein 

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Top 50 coexpressed genes to FRA3 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FRA3 (ath-r.7 coexpression data)

CoexMap"842869"


athFRA3 | Entrez gene ID : 842869      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 2 2 3 2 3 2 2 1 2 3 3 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046856 [list] [network] phosphatidylinositol dephosphorylation  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001321558.1 [sequence] [blastp]
NP_176736.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  E.R. 1,  chlo 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1  (predict for NP_001321558.1)
nucl 5,  E.R. 1,  chlo 1,  cyto 1,  mito 1,  vacu 1,  cysk 1,  chlo_mito 1,  E.R._plas 1  (predict for NP_176736.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001321558.1)
other 5  (predict for NP_176736.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
FRA3
ath-u.5
for
FRA3
ath-m.9
for
FRA3
ath-e.2
for
FRA3
ath-m.4.bio
for
FRA3
ath-m.4.hor
for
FRA3
ath-m.4.lig
for
FRA3
ath-m.4.str
for
FRA3
ath-m.4.tis
for
FRA3
ath-u.5
for
5PTase14
ath-u.5
for
5PTase12
ath-u.5
for
5PTASE13
bra-r.6
for
103831060
bra-r.6
for
103836521
bna-r.1
for
106400297
bna-r.1
for
106371170
ghi-r.1
for
107933638
ghi-r.1
for
107920091
ghi-r.1
for
107895048
cit-r.1
for
102624548
cit-r.1
for
102616657
gma-u.5
for
100787864
gma-u.5
for
100805728
gma-u.5
for
100801342
vvi-u.5
for
100253200
vvi-u.5
for
100245620
ppo-u.5
for
7472520
ppo-u.5
for
7460656
mtr-u.5
for
25484583
sly-u.5
for
101253551
sly-u.5
for
101257789
sot-r.1
for
102601778
sot-r.1
for
102599614
sot-r.1
for
102597555
nta-r.1
for
107812880
nta-r.1
for
107827348
nta-r.1
for
107758925
osa-u.5
for
4346083
osa-u.5
for
4329359
zma-u.5
for
103632989
zma-u.5
for
103642551
zma-u.5
for
103647560
tae-r.2
for
123164738
tae-r.2
for
123151578
tae-r.2
for
123085310
hvu-r.1
for
123408301
hvu-r.1
for
123449131
sbi-r.1
for
8056673
sbi-r.1
for
8063976
bdi-r.1
for
100829310
bdi-r.1
for
100838416
bdi-r.1
for
100839321
cre-r.1
for
CHLRE_12g530050v5


Ortholog ID: 1375
Species ath ath ath bra bra bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol FRA3 5PTase14 5PTase12 LOC103831060 LOC103844105 LOC106400297 LOC111214083 LOC107933638 LOC107895048 LOC107892486 LOC102624548 LOC102616657 LOC100805728 LOC100801342 LOC100817047 LOC100253200 LOC100245620 LOC7472520 LOC7460656 LOC25484583 LOC101253551 LOC101257789 LOC101268374 LOC102601778 LOC102599614 LOC102597555 LOC107812880 LOC107807236 LOC107832346 LOC4346083 LOC4329359 LOC103647560 LOC103653189 LOC109944120 LOC123164738 LOC123155975 LOC123104258 LOC123408301 LOC123449131 LOC8056673 LOC8063976 LOC100829310 LOC100838416 LOC100839321 CHLRE_12g530050v5
Function* Endonuclease/exonuclease/phosphatase family protein endonuclease/exonuclease/phosphatase family protein Endonuclease/exonuclease/phosphatase family protein type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 13 type I inositol polyphosphate 5-phosphatase 13 type I inositol polyphosphate 5-phosphatase 13 type I inositol polyphosphate 5-phosphatase 12 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12-like type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12 type I inositol polyphosphate 5-phosphatase 12 type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12-like type I inositol polyphosphate 5-phosphatase 12-like type I inositol polyphosphate 5-phosphatase 12-like type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12-like type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 12-like type I inositol polyphosphate 5-phosphatase 13 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 13 type I inositol polyphosphate 5-phosphatase 12 type II inositol polyphosphate 5-phosphatase 15-like type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type I inositol polyphosphate 5-phosphatase 13 type II inositol polyphosphate 5-phosphatase 15-like type II inositol polyphosphate 5-phosphatase 15-like type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 type II inositol polyphosphate 5-phosphatase 15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta00564 Glycerophospholipid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
nta00564 Glycerophospholipid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842869 817740 818994 103831060 103844105 106400297 111214083 107933638 107895048 107892486 102624548 102616657 100805728 100801342 100817047 100253200 100245620 7472520 7460656 25484583 101253551 101257789 101268374 102601778 102599614 102597555 107812880 107807236 107832346 4346083 4329359 103647560 103653189 109944120 123164738 123155975 123104258 123408301 123449131 8056673 8063976 100829310 100838416 100839321 5718603
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