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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT1G78420   RING/U-box superfamily protein 
 ath-u.5   AT1G78420   RING/U-box superfamily protein 
 ath-m.9   AT1G78420   RING/U-box superfamily protein 
 ath-e.2   AT1G78420   RING/U-box superfamily protein 
 ath-m.4.bio   AT1G78420   RING/U-box superfamily protein 
 ath-m.4.hor   AT1G78420   RING/U-box superfamily protein 
 ath-m.4.lig   AT1G78420   RING/U-box superfamily protein 
 ath-m.4.str   AT1G78420   RING/U-box superfamily protein 
 ath-m.4.tis   AT1G78420   RING/U-box superfamily protein 
 ath-u.5   AT1G17145   RING/U-box superfamily protein 
 bra-r.6   103853127   E3 ubiquitin-protein ligase DA2 
 bra-r.6   103832322   E3 ubiquitin-protein ligase DA2 
 bra-r.6   103872500   E3 ubiquitin-protein ligase DA2L 
 bna-r.1   106354697   E3 ubiquitin-protein ligase DA2-like 
 bna-r.1   BNAC06G38900D   E3 ubiquitin-protein ligase DA2 
 bna-r.1   106346715   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107936183   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107932690   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107920435   E3 ubiquitin-protein ligase DA2L 
 cit-r.1   102626199   E3 ubiquitin-protein ligase DA2L 
 gma-u.5   100817758   E3 ubiquitin-protein ligase DA2L 
 gma-u.5   100816142   E3 ubiquitin-protein ligase DA2L 
 vvi-u.5   100256555   E3 ubiquitin-protein ligase DA2 
 ppo-u.5   7471890   E3 ubiquitin-protein ligase DA2L 
 ppo-u.5   7459113   E3 ubiquitin-protein ligase DA2L 
 mtr-u.5   25487074   E3 ubiquitin-protein ligase DA2L 
 sly-u.5   101267326   E3 ubiquitin-protein ligase DA2L 
 sot-r.1   102601386   uncharacterized LOC102601386 
 nta-r.1   107767158   E3 ubiquitin-protein ligase DA2L-like 
 nta-r.1   107820265   E3 ubiquitin-protein ligase DA2L 
 osa-u.5   4328856   E3 ubiquitin-protein ligase GW2 
 osa-u.5   4340173   E3 ubiquitin-protein ligase GW2 
 zma-u.5   100277474   putative RING zinc finger domain superfamily protein 
 tae-r.2   123144446   E3 ubiquitin-protein ligase GW2 
 tae-r.2   123150689   E3 ubiquitin-protein ligase DA2L 
 tae-r.2   123137004   E3 ubiquitin-protein ligase GW2 
 hvu-r.1   123401431   E3 ubiquitin-protein ligase GW2 
 hvu-r.1   123409464   E3 ubiquitin-protein ligase DA2L-like 
 sbi-r.1   110435364   uncharacterized LOC110435364 
 sbi-r.1   8085584   uncharacterized LOC8085584 
 bdi-r.1   100834478   protein sip5 
 bdi-r.1   100842868   uncharacterized LOC100842868 
 cre-r.1   CHLRE_26g756897v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G78420 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G78420 (ath-r.7 coexpression data)

CoexMap"844178"


athAT1G78420 | Entrez gene ID : 844178      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 2 1 2 1 1 1 2 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080113 [list] [network] regulation of seed growth  (13 genes)  IMP  
GO:0046620 [list] [network] regulation of organ growth  (19 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IDA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (83 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001185425.1 [sequence] [blastp]
NP_565180.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_001185425.1)
nucl 8,  mito 1  (predict for NP_565180.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001185425.1)
other 8,  mito 5  (predict for NP_565180.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT1G78420
ath-u.5
for
AT1G78420
ath-m.9
for
AT1G78420
ath-e.2
for
AT1G78420
ath-m.4.bio
for
AT1G78420
ath-m.4.hor
for
AT1G78420
ath-m.4.lig
for
AT1G78420
ath-m.4.str
for
AT1G78420
ath-m.4.tis
for
AT1G78420
ath-u.5
for
AT1G17145
bra-r.6
for
103853127
bra-r.6
for
103832322
bra-r.6
for
103872500
bna-r.1
for
106354697
bna-r.1
for
BNAC06G38900D
bna-r.1
for
106346715
ghi-r.1
for
107936183
ghi-r.1
for
107932690
ghi-r.1
for
107920435
cit-r.1
for
102626199
gma-u.5
for
100817758
gma-u.5
for
100816142
vvi-u.5
for
100256555
ppo-u.5
for
7471890
ppo-u.5
for
7459113
mtr-u.5
for
25487074
sly-u.5
for
101267326
sot-r.1
for
102601386
nta-r.1
for
107767158
nta-r.1
for
107820265
osa-u.5
for
4328856
osa-u.5
for
4340173
zma-u.5
for
100277474
tae-r.2
for
123144446
tae-r.2
for
123150689
tae-r.2
for
123137004
hvu-r.1
for
123401431
hvu-r.1
for
123409464
sbi-r.1
for
110435364
sbi-r.1
for
8085584
bdi-r.1
for
100834478
bdi-r.1
for
100842868
cre-r.1
for
CHLRE_26g756897v5


Ortholog ID: 2519
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT1G78420 AT1G17145 LOC103853127 LOC103832322 LOC103872500 LOC106354697 BNAC06G38900D LOC106447227 LOC107932690 LOC107920435 LOC107904003 LOC102626199 LOC100817758 LOC100816142 LOC100256555 LOC7471890 LOC7459113 LOC25487074 LOC101267326 LOC102601386 LOC107767158 LOC107820265 LOC4328856 LOC4340173 LOC100275385 LOC123150689 LOC123165337 LOC123409464 LOC123448439 LOC110435364 LOC8085584 LOC100834478 LOC100842868 CHLRE_26g756897v5
Function* RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2-like E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L uncharacterized LOC102601386 E3 ubiquitin-protein ligase DA2L-like E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase GW2 E3 ubiquitin-protein ligase GW2 uncharacterized LOC100275385 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase GW2 E3 ubiquitin-protein ligase DA2L-like E3 ubiquitin-protein ligase DA2-like uncharacterized LOC110435364 uncharacterized LOC8085584 protein sip5 uncharacterized LOC100842868 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04130 SNARE interactions in vesicular transport 3
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00592 alpha-Linolenic acid metabolism 2
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844178 838285 103853127 103832322 103872500 106354697 106354556 106447227 107932690 107920435 107904003 102626199 100817758 100816142 100256555 7471890 7459113 25487074 101267326 102601386 107767158 107820265 4328856 4340173 100275385 123150689 123165337 123409464 123448439 110435364 8085584 100834478 100842868 5727786
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