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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   GA2ox5   gibberellin 2-oxidase 
 sly-r.6   GA2ox5   gibberellin 2-oxidase 
 sly-u.5   GA2ox4   gibberellin 2-oxidase 
 sly-u.5   101249786   gibberellin 2-beta-dioxygenase 1 
 ath-u.5   GA2OX2   gibberellin 2-oxidase 
 gma-u.5   GA2OX8   gibberellin 2-beta-dioxygenase 8 
 vvi-u.5   100264177   gibberellin 2-beta-dioxygenase 1 
 vvi-u.5   100244543   gibberellin 2-beta-dioxygenase 
 vvi-u.5   100248356   gibberellin 2-beta-dioxygenase 1 
 ppo-u.5   7490835   gibberellin 2-beta-dioxygenase 
 ppo-u.5   7459116   gibberellin 2-beta-dioxygenase 1 
 mtr-u.5   25502480   gibberellin 2-beta-dioxygenase 1 
 mtr-u.5   11443852   gibberellin 2-beta-dioxygenase 
 mtr-u.5   25487088   gibberellin 2-beta-dioxygenase 1 
 osa-u.5   4339310   gibberellin 2-beta-dioxygenase 3-like 
 osa-u.5   4325145   gibberellin 2-beta-dioxygenase 3-like 
 zma-u.5   103636636   gibberellin 2-beta-dioxygenase 3 
 zma-u.5   103651195   gibberellin 2-beta-dioxygenase 
 zma-u.5   100281876   gibberellin 2-beta-dioxygenase 

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Top 50 coexpressed genes to GA2ox5 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GA2ox5 (sly-u.5 coexpression data)

CoexMap"100134890"


slyGA2ox5 | Entrez gene ID : 100134890      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00904 [list] [network] Diterpenoid biosynthesis (30 genes)
GO BP
GO:0045487 [list] [network] gibberellin catabolic process  (11 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (118 genes)  IEA  
GO CC
GO MF
Protein NP_001234757.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 4,  nucl 4,  chlo 1,  cyto 1,  extr 1  (predict for NP_001234757.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001234757.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
GA2ox5

.
sly-r.6
for
GA2ox5

.
sly-u.5
for
GA2ox4

.
sly-u.5
for
101249786

.
ath-u.5
for
GA2OX2

.
gma-u.5
for
GA2OX8

.
vvi-u.5
for
100264177

.
vvi-u.5
for
100244543

.
vvi-u.5
for
100248356

.
ppo-u.5
for
7490835

.
ppo-u.5
for
7459116

.
mtr-u.5
for
25502480

.
mtr-u.5
for
11443852

.
mtr-u.5
for
25487088

.
osa-u.5
for
4339310

.
osa-u.5
for
4325145

.
zma-u.5
for
103636636

.
zma-u.5
for
103651195

.
zma-u.5
for
100281876

.


Ortholog ID: 1095
Species ath gma sly osa osa zma zma vvi vvi ppo mtr mtr tae hvu hvu ghi ghi bna bna sbi sot cit cit bdi bdi nta
Symbol GA2OX2 GA2OX8 GA2ox2 LOC4325145 LOC4339310 LOC100281876 LOC103651195 LOC100248356 LOC100244543 LOC7490835 LOC25502480 LOC11443852 LOC123062094 LOC123416361 LOC123444441 LOC121230864 LOC121203218 LOC106435076 LOC106375947 LOC8072094 LOC102599704 LOC102614198 LOC102628050 LOC100845998 LOC100831936 LOC107829774
Function* gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 8 gibberellin 2-oxidase 2 gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1-like gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 10
sly04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00052 Galactose metabolism 3
vvi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00350 Tyrosine metabolism 4
tae00360 Phenylalanine metabolism 4
tae00310 Lysine degradation 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
ghi00904 Diterpenoid biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 3
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 5
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cit00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 4
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839883 100806026 100037505 4325145 4339310 100281876 103651195 100248356 100244543 7490835 25502480 11443852 123062094 123416361 123444441 121230864 121203218 106435076 106375947 8072094 102599704 102614198 102628050 100845998 100831936 107829774
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