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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   ca3   carbonic anhydrase 
 sly-r.6   ca3   carbonic anhydrase 
 sly-m.5   ca3   carbonic anhydrase 
 sly-u.5   101257401   beta carbonic anhydrase 5, chloroplastic 
 sly-u.5   543802   carbonic anhydrase 2 
 sly-u.5   ca2   carbonic anhydrase 
 sot-r.1   102589374   carbonic anhydrase, chloroplastic-like 
 sot-r.1   102599109   beta carbonic anhydrase 5, chloroplastic 
 sot-r.1   102604042   carbonic anhydrase 2 
 nta-r.1   107761427   carbonic anhydrase 2-like 
 nta-r.1   107812321   carbonic anhydrase, chloroplastic-like 
 nta-r.1   107815797   carbonic anhydrase, chloroplastic-like 
 ath-u.5   BCA3   beta carbonic anhydrase 3 
 ath-u.5   BCA4   beta carbonic anhydrase 4 
 ath-u.5   BCA6   beta carbonic anhydrase 6 
 gma-u.5   100781868   carbonic anhydrase, chloroplastic 
 gma-u.5   100500448   carbonic anhydrase, chloroplastic 
 gma-u.5   100812124   carbonic anhydrase, chloroplastic-like 
 bra-r.6   103870985   beta carbonic anhydrase 1, chloroplastic 
 bra-r.6   103871505   beta carbonic anhydrase 3 
 bra-r.6   103829262   beta carbonic anhydrase 3 
 vvi-u.5   100263997   beta carbonic anhydrase 5, chloroplastic 
 ppo-u.5   7453765   carbonic anhydrase 2 
 ppo-u.5   7460782   carbonic anhydrase 2 
 mtr-u.5   11435508   beta carbonic anhydrase 5, chloroplastic 
 mtr-u.5   11429026   carbonic anhydrase 2 
 mtr-u.5   11428425   carbonic anhydrase, chloroplastic 
 ghi-r.1   107926472   carbonic anhydrase 2 
 ghi-r.1   107925995   carbonic anhydrase, chloroplastic 
 ghi-r.1   107909667   carbonic anhydrase 2 
 bna-r.1   125589036   beta carbonic anhydrase 3-like 
 bna-r.1   106417628   beta carbonic anhydrase 4-like 
 bna-r.1   106402362   beta carbonic anhydrase 5, chloroplastic-like 
 cit-r.1   102626530   beta carbonic anhydrase 5, chloroplastic 
 cit-r.1   102614650   carbonic anhydrase 2 
 cit-r.1   102624289   beta carbonic anhydrase 5, chloroplastic-like 
 osa-u.5   4347305   beta carbonic anhydrase 5, chloroplastic 
 osa-u.5   4326583   carbonic anhydrase, chloroplastic 
 osa-u.5   9266472   carbonic anhydrase, chloroplastic 
 zma-u.5   100272439   carbonic anhydrase 
 zma-u.5   100274597   carbonic anhydrase 
 zma-u.5   100275493   carbonic anhydrase 
 tae-r.2   123070200   carbonic anhydrase, chloroplastic 
 tae-r.2   123149008   carbonic anhydrase, chloroplastic 
 hvu-r.1   123443950   carbonic anhydrase, chloroplastic 
 hvu-r.1   123411871   carbonic anhydrase, chloroplastic-like 
 hvu-r.1   123411872   carbonic anhydrase, chloroplastic-like 
 sbi-r.1   110432850   beta carbonic anhydrase 5, chloroplastic-like 
 sbi-r.1   110433917   carbonic anhydrase, chloroplastic-like 
 bdi-r.1   100834303   carbonic anhydrase, chloroplastic 
 bdi-r.1   100834132   beta carbonic anhydrase 5, chloroplastic 
 bdi-r.1   104582824   carbonic anhydrase, chloroplastic 
 cre-r.1   CHLRE_09g405750v5   uncharacterized protein 
 cre-r.1   CHLRE_13g607350v5   uncharacterized protein 

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Top 50 coexpressed genes to ca3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ca3 (sly-u.5 coexpression data)

CoexMap"100147727"


slyca3 | Entrez gene ID : 100147727      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 6 3 3 3 3 3 1 2 3 3 3 3 3 3 2 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00910 [list] [network] Nitrogen metabolism (36 genes)
GO BP
GO:0015976 [list] [network] carbon utilization  (4 genes)  IEA  
GO CC
GO MF
GO:0004089 [list] [network] carbonate dehydratase activity  (12 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein NP_001233847.1 [sequence] [blastp]
XP_069149198.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001233847.1)
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_069149198.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001233847.1)
other 7  (predict for XP_069149198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
ca3
sly-r.6
for
ca3
sly-m.5
for
ca3
sly-u.5
for
101257401
sly-u.5
for
543802
sly-u.5
for
ca2
sot-r.1
for
102589374
sot-r.1
for
102599109
sot-r.1
for
102604042
nta-r.1
for
107761427
nta-r.1
for
107812321
nta-r.1
for
107815797
ath-u.5
for
BCA3
ath-u.5
for
BCA4
ath-u.5
for
BCA6
gma-u.5
for
100781868
gma-u.5
for
100500448
gma-u.5
for
100812124
bra-r.6
for
103870985
bra-r.6
for
103871505
bra-r.6
for
103829262
vvi-u.5
for
100263997
ppo-u.5
for
7453765
ppo-u.5
for
7460782
mtr-u.5
for
11435508
mtr-u.5
for
11429026
mtr-u.5
for
11428425
ghi-r.1
for
107926472
ghi-r.1
for
107925995
ghi-r.1
for
107909667
bna-r.1
for
125589036
bna-r.1
for
106417628
bna-r.1
for
106402362
cit-r.1
for
102626530
cit-r.1
for
102614650
cit-r.1
for
102624289
osa-u.5
for
4347305
osa-u.5
for
4326583
osa-u.5
for
9266472
zma-u.5
for
100272439
zma-u.5
for
100274597
zma-u.5
for
100275493
tae-r.2
for
123070200
tae-r.2
for
123149008
hvu-r.1
for
123443950
hvu-r.1
for
123411871
hvu-r.1
for
123411872
sbi-r.1
for
110432850
sbi-r.1
for
110433917
bdi-r.1
for
100834303
bdi-r.1
for
100834132
bdi-r.1
for
104582824
cre-r.1
for
CHLRE_09g405750v5
cre-r.1
for
CHLRE_13g607350v5


Ortholog ID: 333
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol ca3 LOC543802 ca2 LOC102589374 LOC102604042 LOC102591490 LOC107761427 LOC107826997 LOC107761423 BCA3 CA2 BCA5 LOC100782859 LOC100807954 LOC100810496 LOC103870985 LOC103829262 LOC103871504 LOC100263997 LOC100249137 LOC7453765 LOC7485034 LOC7468858 LOC11428425 LOC11433869 LOC11407419 LOC107909667 LOC121217832 LOC121224462 LOC106361095 LOC106429957 LOC106434319 LOC102614650 LOC102624289 LOC102616455 LOC4347305 LOC4326583 LOC9266472 LOC100272439 LOC100275493 LOC100382491 LOC123104020 LOC123112251 LOC123411871 LOC123411872 LOC110432850 LOC110433917 LOC100834303 LOC100834132 LOC104582824 CHLRE_09g405750v5 CHLRE_13g607350v5
Function* carbonic anhydrase carbonic anhydrase 2 carbonic anhydrase carbonic anhydrase, chloroplastic-like carbonic anhydrase 2 carbonic anhydrase, chloroplastic carbonic anhydrase 2-like carbonic anhydrase 2 carbonic anhydrase 2 beta carbonic anhydrase 3 carbonic anhydrase 2 beta carbonic anhydrase 5 beta carbonic anhydrase 5, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase beta carbonic anhydrase 1, chloroplastic beta carbonic anhydrase 3 beta carbonic anhydrase 3 beta carbonic anhydrase 5, chloroplastic beta carbonic anhydrase 1, chloroplastic carbonic anhydrase 2 beta carbonic anhydrase 5, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase 2 carbonic anhydrase 2 beta carbonic anhydrase 6, mitochondrial carbonic anhydrase 2 beta carbonic anhydrase 5, chloroplastic beta carbonic anhydrase 2, chloroplastic beta carbonic anhydrase 1, chloroplastic carbonic anhydrase 2 beta carbonic anhydrase 5, chloroplastic-like beta carbonic anhydrase 1, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic carbonic anhydrase, chloroplastic carbonic anhydrase carbonic anhydrase carbonic anhydrase6 beta carbonic anhydrase 5, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic-like carbonic anhydrase, chloroplastic-like beta carbonic anhydrase 5, chloroplastic-like carbonic anhydrase, chloroplastic-like carbonic anhydrase, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00480 Glutathione metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 8
ath01200 Carbon metabolism 8
ath00910 Nitrogen metabolism 5
ath00710 Carbon fixation by Calvin cycle 5
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 9
ath01200 Carbon metabolism 9
ath00061 Fatty acid biosynthesis 8
ath00010 Glycolysis / Gluconeogenesis 7
ath01212 Fatty acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00053 Ascorbate and aldarate metabolism 2
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00910 Nitrogen metabolism 3
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00591 Linoleic acid metabolism 4
bra00592 alpha-Linolenic acid metabolism 4
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00062 Fatty acid elongation 4
ppo01040 Biosynthesis of unsaturated fatty acids 4
ppo01212 Fatty acid metabolism 4
ppo01240 Biosynthesis of cofactors 2
ppo00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00062 Fatty acid elongation 4
mtr01212 Fatty acid metabolism 4
mtr01040 Biosynthesis of unsaturated fatty acids 3
mtr00564 Glycerophospholipid metabolism 2
mtr00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00430 Taurine and hypotaurine metabolism 2
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00910 Nitrogen metabolism 2
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 8
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa04146 Peroxisome 2
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 4
zma00061 Fatty acid biosynthesis 3
zma01212 Fatty acid metabolism 3
zma00010 Glycolysis / Gluconeogenesis 3
zma00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma00620 Pyruvate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01200 Carbon metabolism 4
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 3
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 9
tae00071 Fatty acid degradation 6
tae00310 Lysine degradation 6
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 11
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 4
hvu00010 Glycolysis / Gluconeogenesis 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 7
hvu01200 Carbon metabolism 6
hvu00710 Carbon fixation by Calvin cycle 5
hvu00910 Nitrogen metabolism 3
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi01200 Carbon metabolism 4
bdi00195 Photosynthesis 3
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 2
cre00480 Glutathione metabolism 2
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100147727 543802 543803 102589374 102604042 102591490 107761427 107826997 107761423 838983 831326 829498 100782859 100807954 100810496 103870985 103829262 103871504 100263997 100249137 7453765 7485034 7468858 11428425 11433869 11407419 107909667 121217832 121224462 106361095 106429957 106434319 102614650 102624289 102616455 4347305 4326583 9266472 100272439 100275493 100382491 123104020 123112251 123411871 123411872 110432850 110433917 100834303 100834132 104582824 5723211 5724648
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