ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100191967	amino acid permease
zma-r.6	100191967	amino acid permease
zma-u.5	100273225	uncharacterized LOC100273225
zma-u.5	100273033	uncharacterized LOC100273033
osa-u.5	4328577	amino acid transporter AVT6A
osa-u.5	4341650	amino acid transporter AVT6E
ath-u.5	AT2G40420	Transmembrane amino acid transporter family protein
ath-u.5	AT3G30390	Transmembrane amino acid transporter family protein
ath-u.5	AT3G56200	Transmembrane amino acid transporter family protein
gma-u.5	100800330	amino acid transporter AVT6C
gma-u.5	100813056	amino acid transporter AVT6C
gma-u.5	100813328	amino acid transporter AVT6E
sly-u.5	101266946	amino acid transporter AVT6C-like
sly-u.5	101264123	amino acid transporter AVT6C
sly-u.5	101261601	amino acid transporter AVT6E
vvi-u.5	100264342	amino acid transporter AVT6A
vvi-u.5	100261172	amino acid transporter AVT6E
vvi-u.5	100258371	amino acid transporter AVT6A
ppo-u.5	18097651	amino acid transporter AVT6A
ppo-u.5	18096680	amino acid transporter AVT6E
ppo-u.5	7464604	amino acid transporter AVT6C
mtr-u.5	11429502	amino acid transporter AVT6C
mtr-u.5	11433846	amino acid transporter AVT6A
mtr-u.5	11425903	amino acid transporter AVT6E

Annotation

functional annotation

KEGG

GO BP

GO:0003333 [list] [network] amino acid transmembrane transport

(26 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0015179 [list] [network] L-amino acid transmembrane transporter activity

(32 genes)

IEA

Protein

NP_001130863.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_001130863.1)

Subcellular
localization
TargetP

chlo 6, other 4

(predict for NP_001130863.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100191967	zma-r.6 for 100191967	zma-u.5 for 100273225	zma-u.5 for 100273033	osa-u.5 for 4328577	osa-u.5 for 4341650	ath-u.5 for AT2G40420	ath-u.5 for AT3G30390	ath-u.5 for AT3G56200	gma-u.5 for 100800330	gma-u.5 for 100813056	gma-u.5 for 100813328	sly-u.5 for 101266946	sly-u.5 for 101264123	sly-u.5 for 101261601	vvi-u.5 for 100264342	vvi-u.5 for 100261172	vvi-u.5 for 100258371	ppo-u.5 for 18097651	ppo-u.5 for 18096680	ppo-u.5 for 7464604	mtr-u.5 for 11429502	mtr-u.5 for 11433846	mtr-u.5 for 11425903

Ortholog

Ortholog ID: 255

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100193855

uncharacterized LOC100273225

sodium-coupled neutral amino acid transporter 1-like

probable sodium-coupled neutral amino acid transporter 6

amino acid transporter AVT6A

amino acid transporter AVT6A-like

amino acid transporter AVT6E

amino acid transporter AVT6A

Transmembrane amino acid transporter family protein

amino acid transporter AVT6C

amino acid transporter AVT6E

amino acid transporter AVT6C-like

amino acid transporter AVT6A

amino acid transporter AVT6E

amino acid transporter AVT6A

amino acid transporter AVT6E

amino acid transporter AVT6A

amino acid transporter AVT6C

amino acid transporter AVT6A

amino acid transporter AVT6C

amino acid transporter AVT6A

probable sodium-coupled neutral amino acid transporter 6

sodium-coupled neutral amino acid transporter 5-like

amino acid transporter AVT6A-like

amino acid transporter AVT6E

amino acid transporter AVT6C-like

amino acid transporter AVT6A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	3
zma00630	Glyoxylate and dicarboxylate metabolism	2
zma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	3
sbi00500	Starch and sucrose metabolism	3
sbi00071	Fatty acid degradation	2
sbi00410	beta-Alanine metabolism	2
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00600	Sphingolipid metabolism	3
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma04141	Protein processing in endoplasmic reticulum	2
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	5
bra01200	Carbon metabolism	4
bra00410	beta-Alanine metabolism	3
bra00330	Arginine and proline metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi01250	Biosynthesis of nucleotide sugars	3
vvi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	2
vvi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	3
sot04120	Ubiquitin mediated proteolysis	2
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	10
nta04075	Plant hormone signal transduction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2
nta00510	N-Glycan biosynthesis	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00920	Sulfur metabolism	3
cre01320	Sulfur cycle	3
cre00230	Purine metabolism	2
cre00261	Monobactam biosynthesis	2
cre00450	Selenocompound metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100193855

100273225

110434582

8058406

4340751

123165452

123400961

123407618

100834084

100843851

844390

100813056

100813328

101266946

101253654

103837226

100261172

100258371

18096680

18107457

11428657

25481310

107955210

107891994

106402309

102601737

102579786

102611275

102606926

107779616

107825488

5720510

5720511

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100191967 (zma-u.5 coexpression data)

Top 50 enrichment test to 100191967 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100191967 (zma-u.5 coexpression data)

Top 50 enrichment test to 100191967 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**