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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100192516   60S ribosomal protein L3-1 
 zma-r.6   100192516   60S ribosomal protein L3-1 
 zma-m.5   100192516   60S ribosomal protein L3-1 
 zma-u.5   101027258   60S ribosomal protein L3 
 zma-u.5   103647030   60S ribosomal protein L3 
 zma-u.5   103646454   60S ribosomal protein L3 
 osa-u.5   4351604   60S ribosomal protein L3-like 
 osa-u.5   4349878   60S ribosomal protein L3-like 
 ath-u.5   RP1   ribosomal protein 1 
 ath-u.5   RPL3B   R-protein L3 B 
 gma-u.5   100792174   60S ribosomal protein L3 
 gma-u.5   100819132   60S ribosomal protein L3 
 gma-u.5   100782902   60S ribosomal protein L3 
 sly-u.5   101266871   large ribosomal subunit protein uL3y 
 sly-u.5   RPL3   ribosomal protein L3 
 vvi-u.5   100267716   large ribosomal subunit protein uL3y 
 vvi-u.5   100260533   large ribosomal subunit protein uL3 
 ppo-u.5   112326952   60S ribosomal protein L3-2 
 ppo-u.5   7468770   60S ribosomal protein L3 
 ppo-u.5   7492475   60S ribosomal protein L3 
 mtr-u.5   25493328   60S ribosomal protein L3 
 mtr-u.5   11428007   60S ribosomal protein L3-1 

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Top 50 coexpressed genes to 100192516 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100192516 (zma-u.5 coexpression data)

CoexMap"100192516"


zmaLOC100192516 | Entrez gene ID : 100192516      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 2 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0006412 [list] [network] translation  (661 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (112 genes)  IEA  
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001131208.1 [sequence] [blastp]
XP_008677941.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 3,  cyto 2,  chlo_mito 2  (predict for NP_001131208.1)
chlo 4,  E.R. 3,  cyto 2,  chlo_mito 2  (predict for XP_008677941.1)
Subcellular
localization
TargetP
chlo 4,  mito 3,  other 3  (predict for NP_001131208.1)
chlo 4,  mito 3,  other 3  (predict for XP_008677941.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100192516

.
zma-r.6
for
100192516

.
zma-m.5
for
100192516

.
zma-u.5
for
101027258

.
zma-u.5
for
103647030

.
zma-u.5
for
103646454

.
osa-u.5
for
4351604

.
osa-u.5
for
4349878

.
ath-u.5
for
RP1

.
ath-u.5
for
RPL3B

.
gma-u.5
for
100792174

.
gma-u.5
for
100819132

.
gma-u.5
for
100782902

.
sly-u.5
for
101266871

.
sly-u.5
for
RPL3

.
vvi-u.5
for
100267716

.
vvi-u.5
for
100260533

.
ppo-u.5
for
112326952

.
ppo-u.5
for
7468770

.
ppo-u.5
for
7492475

.
mtr-u.5
for
25493328

.
mtr-u.5
for
11428007

.


Ortholog ID: 2184
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol RP1 RPL3B LOC100782902 LOC100792174 RPL3 LOC101266871 LOC4351604 LOC4349878 LOC100192516 LOC103647029 LOC103838748 LOC103848547 LOC100260533 LOC100267716 LOC112326952 LOC7492475 LOC25493328 LOC11428007 LOC543049 LOC123096408 LOC123399600 LOC123447985 LOC107943200 LOC107898684 LOC106410501 LOC106371594 CHLRE_10g417700v5 LOC8073619 LOC8066789 LOC102590107 LOC102598069 LOC102611748 LOC102619970 LOC100843702 LOC107768851 LOC107799324
Function* ribosomal protein 1 R-protein L3 B 60S ribosomal protein L3 60S ribosomal protein L3 ribosomal protein L3 large ribosomal subunit protein uL3y 60S ribosomal protein L3-like 60S ribosomal protein L3-like 60S ribosomal protein L3-1 60S ribosomal protein L3 60S ribosomal protein L3-1 60S ribosomal protein L3-1 large ribosomal subunit protein uL3 large ribosomal subunit protein uL3y 60S ribosomal protein L3-2 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-1 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-like 60S ribosomal protein L3 60S ribosomal protein L3-2 60S ribosomal protein L3-1 60S ribosomal protein L3-1 ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-2 60S ribosomal protein L3-like 60S ribosomal protein L3-2 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-like large ribosomal subunit protein uL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 8
ppo03010 Ribosome 8
ppo00510 N-Glycan biosynthesis 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi01212 Fatty acid metabolism 6
ghi00780 Biotin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03040 Spliceosome 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840916 842454 100782902 100792174 778284 101266871 4351604 4349878 100192516 103647029 103838748 103848547 100260533 100267716 112326952 7492475 25493328 11428007 543049 123096408 123399600 123447985 107943200 107898684 106410501 106371594 5728341 8073619 8066789 102590107 102598069 102611748 102619970 100843702 107768851 107799324
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