ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100193197	Ypt/Rab-GAP domain of gyp1p superfamily protein
zma-r.6	100193197	Ypt/Rab-GAP domain of gyp1p superfamily protein
zma-m.5	100193197	Ypt/Rab-GAP domain of gyp1p superfamily protein
zma-u.5	103626094	GTPase-activating protein gyp7
zma-u.5	103633061	GTPase-activating protein gyp7
zma-u.5	100277201	uncharacterized LOC100277201
osa-u.5	4349126	rab GTPase-activating protein 22
osa-u.5	4347651	rab GTPase-activating protein 22
osa-u.5	4346233	rab GTPase-activating protein 22
ath-u.5	AT3G49350	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT5G24390	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT5G41940	Ypt/Rab-GAP domain of gyp1p superfamily protein
gma-u.5	100793557	rab GTPase-activating protein 22
gma-u.5	100789579	rab GTPase-activating protein 22
gma-u.5	100791150	rab GTPase-activating protein 22
sly-u.5	101263416	rab GTPase-activating protein 22
sly-u.5	101243683	rab GTPase-activating protein 22
vvi-u.5	100265048	rab GTPase-activating protein 22
vvi-u.5	100243483	rab GTPase-activating protein 22
ppo-u.5	7477822	rab GTPase-activating protein 22
ppo-u.5	7496438	rab GTPase-activating protein 22
ppo-u.5	7465340	rab GTPase-activating protein 22
mtr-u.5	11415371	rab GTPase-activating protein 22
mtr-u.5	11434631	rab GTPase-activating protein 22

Top 50 coexpressed genes to 100193197 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100193197 (zma-u.5 coexpression data)

CoexMap"100193197"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0090630 [list] [network] activation of GTPase activity

(17 genes)

IEA

GO CC

GO MF

GO:0005096 [list] [network] GTPase activator activity

(92 genes)

IEA

Protein

NP_001345613.1 [sequence] [blastp]
XP_008676532.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 2, cyto_mito 1, nucl 1	(predict for NP_001345613.1)
chlo 4, mito 3, cyto_mito 2, nucl 1	(predict for XP_008676532.1)

Subcellular
localization
TargetP

mito 7, chlo 4	(predict for NP_001345613.1)
mito 7, chlo 4	(predict for XP_008676532.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100193197	zma-r.6 for 100193197	zma-m.5 for 100193197	zma-u.5 for 103626094	zma-u.5 for 103633061	zma-u.5 for 100277201	osa-u.5 for 4349126	osa-u.5 for 4347651	osa-u.5 for 4346233	ath-u.5 for AT3G49350	ath-u.5 for AT5G24390	ath-u.5 for AT5G41940	gma-u.5 for 100793557	gma-u.5 for 100789579	gma-u.5 for 100791150	sly-u.5 for 101263416	sly-u.5 for 101243683	vvi-u.5 for 100265048	vvi-u.5 for 100243483	ppo-u.5 for 7477822	ppo-u.5 for 7496438	ppo-u.5 for 7465340	mtr-u.5 for 11415371	mtr-u.5 for 11434631

Ortholog

Ortholog ID: 1464

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

GTPase-activating protein gyp7

rab GTPase-activating protein 22

rab GTPase-activating protein 22-like

uncharacterized LOC100845343

GTPase-activating protein gyp7

Ypt/Rab-GAP domain of gyp1p superfamily protein

rab GTPase-activating protein 22

small G protein signaling modulator 1

GTPase-activating protein GYP7

rab GTPase-activating protein 22

rab GTPase-activating protein 22-like

GTPase-activating protein gyp7-like

small G protein signaling modulator 2-like

rab GTPase-activating protein 22

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2
bdi03060	Protein export	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma00620	Pyruvate metabolism	4
gma01200	Carbon metabolism	4
gma01240	Biosynthesis of cofactors	3
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	5
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra04145	Phagosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	5
vvi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00620	Pyruvate metabolism	4
ghi01200	Carbon metabolism	4
ghi01230	Biosynthesis of amino acids	4
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

103626094

103633061

8058629

8062071

4347651

4346233

123152397

123156502

123400038

123407234

100845343

100832061

824097

835439

100789579

100791150

101243683

101263416

103850242

103874308

100243483

100265048

7477822

7465340

11415371

11434631

107904518

107904553

106376475

111211060

102587064

102580964

102625885

102610581

107823218

107785334

5725991

The preparation time of this page was 0.2 [sec].


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	3	2	2	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100193197 (zma-u.5 coexpression data)

Top 50 enrichment test to 100193197 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**