ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100216688	uncharacterized LOC100216688
zma-r.6	100216688	uncharacterized LOC100216688
zma-u.5	100193390	uncharacterized LOC100193390
sbi-r.1	8077305	2Fe-2S ferredoxin
sbi-r.1	110433025	2Fe-2S ferredoxin-like
osa-u.5	4342226	adrenodoxin-like protein 2, mitochondrial
osa-u.5	4347157	uncharacterized LOC4347157
tae-r.2	123095679	2Fe-2S ferredoxin
tae-r.2	123103771	2Fe-2S ferredoxin
tae-r.2	123121556	2Fe-2S ferredoxin
hvu-r.1	123398016	2Fe-2S ferredoxin-like
hvu-r.1	123407476	2Fe-2S ferredoxin-like
bdi-r.1	100841673	adrenodoxin-like protein 2, mitochondrial
bdi-r.1	100839282	2Fe-2S ferredoxin
ath-u.5	MFDX1	mitochondrial ferredoxin 1
ath-u.5	MFDX2	MITOCHONDRIAL FERREDOXIN 2
gma-u.5	100807931	2Fe-2S ferredoxin
gma-u.5	100800358	adrenodoxin-like protein 2, mitochondrial
gma-u.5	100787867	2Fe-2S ferredoxin-like
sly-u.5	101246790	uncharacterized LOC101246790
sly-u.5	101265666	uncharacterized LOC101265666
bra-r.6	103858692	adrenodoxin-like protein 2, mitochondrial
bra-r.6	103834208	adrenodoxin-like protein 2, mitochondrial
vvi-u.5	100261247	uncharacterized LOC100261247
ppo-u.5	18094262	uncharacterized LOC18094262
ppo-u.5	7478301	uncharacterized LOC7478301
mtr-u.5	11438631	2Fe-2S ferredoxin
mtr-u.5	25485645	adrenodoxin-like protein 1, mitochondrial
ghi-r.1	107958829	2Fe-2S ferredoxin
ghi-r.1	107963155	adrenodoxin-like protein 1, mitochondrial
ghi-r.1	107935816	adrenodoxin-like protein 2, mitochondrial
bna-r.1	106388258	adrenodoxin-like protein 2, mitochondrial
bna-r.1	106389896	adrenodoxin-like protein 2, mitochondrial
bna-r.1	111212206	adrenodoxin-like protein 2, mitochondrial
sot-r.1	102598716	adrenodoxin-like protein 2, mitochondrial
sot-r.1	102602069	adrenodoxin-like protein 2, mitochondrial
cit-r.1	102608099	uncharacterized LOC102608099
nta-r.1	107767896	uncharacterized LOC107767896
nta-r.1	107785503	uncharacterized LOC107785503
nta-r.1	107790849	uncharacterized LOC107790849
cre-r.1	CHLRE_12g559950v5	uncharacterized protein

Top 50 coexpressed genes to 100216688 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100216688 (zma-u.5 coexpression data)

CoexMap"100216688"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0140647 [list] [network] P450-containing electron transport chain

(7 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(746 genes)

IEA

GO MF

GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding	(50 genes)	IEA
GO:0009055 [list] [network] electron transfer activity	(187 genes)	IEA

Protein

NP_001345018.1 [sequence] [blastp]
XP_008658150.1 [sequence] [blastp]
XP_008658151.1 [sequence] [blastp]
XP_008658153.1 [sequence] [blastp]
XP_035817972.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, chlo_mito 5, mito 4	(predict for NP_001345018.1)
chlo 6, chlo_mito 5, mito 4	(predict for XP_008658150.1)
chlo 6, chlo_mito 5, mito 4	(predict for XP_008658151.1)
chlo 7, mito 1, nucl 1, extr 1, cyto_mito 1, mito_plas 1	(predict for XP_008658153.1)
chlo 7, mito 1, nucl 1, extr 1, cyto_mito 1, mito_plas 1	(predict for XP_035817972.1)

Subcellular
localization
TargetP

mito 7	(predict for NP_001345018.1)
mito 7	(predict for XP_008658150.1)
mito 7	(predict for XP_008658151.1)
mito 5	(predict for XP_008658153.1)
mito 5	(predict for XP_035817972.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100216688	zma-r.6 for 100216688	zma-u.5 for 100193390	sbi-r.1 for 8077305	sbi-r.1 for 110433025	osa-u.5 for 4342226	osa-u.5 for 4347157	tae-r.2 for 123095679	tae-r.2 for 123103771	tae-r.2 for 123121556	hvu-r.1 for 123398016	hvu-r.1 for 123407476	bdi-r.1 for 100841673	bdi-r.1 for 100839282	ath-u.5 for MFDX1	ath-u.5 for MFDX2	gma-u.5 for 100807931	gma-u.5 for 100800358	gma-u.5 for 100787867	sly-u.5 for 101246790	sly-u.5 for 101265666	bra-r.6 for 103858692	bra-r.6 for 103834208	vvi-u.5 for 100261247	ppo-u.5 for 18094262	ppo-u.5 for 7478301	mtr-u.5 for 11438631	mtr-u.5 for 25485645	ghi-r.1 for 107958829	ghi-r.1 for 107963155	ghi-r.1 for 107935816	bna-r.1 for 106388258	bna-r.1 for 106389896	bna-r.1 for 111212206	sot-r.1 for 102598716	sot-r.1 for 102602069	cit-r.1 for 102608099	nta-r.1 for 107767896	nta-r.1 for 107785503	nta-r.1 for 107790849	cre-r.1 for CHLRE_12g559950v5

Ortholog

Ortholog ID: 3596

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

MFDX1

MFDX2

Function^*

uncharacterized LOC100216688

uncharacterized LOC100193390

2Fe-2S ferredoxin

2Fe-2S ferredoxin-like

adrenodoxin-like protein 2, mitochondrial

uncharacterized LOC4347157

2Fe-2S ferredoxin

2Fe-2S ferredoxin-like

adrenodoxin-like protein 2, mitochondrial

2Fe-2S ferredoxin

mitochondrial ferredoxin 1

MITOCHONDRIAL FERREDOXIN 2

2Fe-2S ferredoxin

adrenodoxin-like protein 2, mitochondrial

2Fe-2S ferredoxin-like

uncharacterized LOC101246790

uncharacterized LOC101265666

adrenodoxin-like protein 2, mitochondrial

uncharacterized LOC100261247

uncharacterized LOC18094262

uncharacterized LOC7478301

2Fe-2S ferredoxin

adrenodoxin-like protein 1, mitochondrial

2Fe-2S ferredoxin

adrenodoxin-like protein 1, mitochondrial

2Fe-2S ferredoxin

adrenodoxin-like protein 2, mitochondrial

uncharacterized LOC102608099

uncharacterized LOC107767896

uncharacterized LOC107785503

uncharacterized LOC107790849

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	4
tae00260	Glycine, serine and threonine metabolism	2
tae00261	Monobactam biosynthesis	2
tae00270	Cysteine and methionine metabolism	2
tae00300	Lysine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	2
tae04141	Protein processing in endoplasmic reticulum	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	6
tae01230	Biosynthesis of amino acids	6
tae00750	Vitamin B6 metabolism	3
tae00261	Monobactam biosynthesis	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath04145	Phagosome	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma00230	Purine metabolism	2
gma00730	Thiamine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03008	Ribosome biogenesis in eukaryotes	2
gma00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	6
ppo00510	N-Glycan biosynthesis	3
ppo00513	Various types of N-glycan biosynthesis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta00280	Valine, leucine and isoleucine degradation	2
nta00410	beta-Alanine metabolism	2
nta00640	Propanoate metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

100216688

100193390

8077305

110433025

4342226

4347157

123103771

123168002

123111990

123398016

123407476

100841673

100839282

825895

827856

100807931

100800358

100787867

101246790

101265666

103858692

103834208

100261247

18094262

7478301

11438631

25485645

107958829

107963155

107907081

106388258

106389896

106360997

102598716

102602069

102608099

107767896

107785503

107790849

5728677

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	3	2	2	2	3	2	2	1	2	2	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100216688 (zma-u.5 coexpression data)

Top 50 enrichment test to 100216688 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**