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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100217272   uncharacterized LOC100217272 
 zma-r.6   100217272   uncharacterized LOC100217272 
 zma-m.5   100217272   uncharacterized LOC100217272 
 zma-u.5   100280516   serine/threonine-protein kinase RIO2 
 osa-u.5   4324901   serine/threonine-protein kinase rio2 
 ath-u.5   AT3G51270   protein serine/threonine kinase 
 gma-u.5   100797607   serine/threonine-protein kinase rio2 
 gma-u.5   100789490   serine/threonine-protein kinase rio2 
 sly-u.5   101248232   serine/threonine-protein kinase rio2 
 vvi-u.5   100259542   serine/threonine-protein kinase rio2 
 ppo-u.5   18106377   serine/threonine-protein kinase rio2 
 mtr-u.5   25501903   uncharacterized LOC25501903 
 mtr-u.5   25493398   serine/threonine-protein kinase rio2 

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Top 50 coexpressed genes to 100217272 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100217272 (zma-u.5 coexpression data)

CoexMap"100217272"


zmaLOC100217272 | Entrez gene ID : 100217272      
Species zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03008 [list] [network] Ribosome biogenesis in eukaryotes (2556 genes)
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (56 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1372 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (23 genes)  IEA  
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (483 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein NP_001137096.2 [sequence] [blastp]
NP_001295305.1 [sequence] [blastp]
XP_008654517.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001137096.2)
nucl 6,  cyto 2,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001295305.1)
nucl 6,  cyto 2,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_008654517.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001137096.2)
other 8  (predict for NP_001295305.1)
other 8  (predict for XP_008654517.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100217272

.
zma-r.6
for
100217272

.
zma-m.5
for
100217272

.
zma-u.5
for
100280516

.
osa-u.5
for
4324901

.
ath-u.5
for
AT3G51270

.
gma-u.5
for
100797607

.
gma-u.5
for
100789490

.
sly-u.5
for
101248232

.
vvi-u.5
for
100259542

.
ppo-u.5
for
18106377

.
mtr-u.5
for
25501903

.
mtr-u.5
for
25493398

.


Ortholog ID: 6283
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT3G51270 LOC100797607 LOC100789490 LOC101248232 LOC4324901 LOC100217272 LOC100280516 LOC103872527 LOC103841047 LOC100259542 LOC18106377 LOC25493398 LOC25501903 LOC123071775 LOC123062909 LOC123445094 LOC121220164 LOC121204850 LOC125596750 LOC106421921 CHLRE_03g159900v5 LOC8077396 LOC8073903 LOC102579428 LOC102611766 LOC100831419 LOC107778936 LOC107800724
Function* protein serine/threonine kinase serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 uncharacterized LOC100217272 serine/threonine-protein kinase RIO2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 uncharacterized LOC25501903 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2-like serine/threonine-protein kinase rio2 uncharacterized protein serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2 serine/threonine-protein kinase rio2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03040 Spliceosome 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03008 Ribosome biogenesis in eukaryotes 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824290 100797607 100789490 101248232 4324901 100217272 100280516 103872527 103841047 100259542 18106377 25493398 25501903 123071775 123062909 123445094 121220164 121204850 125596750 106421921 5722999 8077396 8073903 102579428 102611766 100831419 107778936 107800724
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