ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100232847	pectinesterase 3
vvi-r.5	100232847	pectinesterase 3
vvi-m.5	100232847	pectinesterase 3
ath-u.5	PME1	pectin methylesterase 1
gma-u.5	100777128	pectinesterase 3-like
gma-u.5	100784642	pectinesterase 3
ppo-u.5	7471605	pectinesterase 3
mtr-u.5	11445925	pectinesterase 3
sly-u.5	101245743	pectinesterase 3

functional annotation

KEGG

GO BP

GO:0042545 [list] [network] cell wall modification

(60 genes)

IEA

GO CC

GO MF

GO:0046910 [list] [network] pectinesterase inhibitor activity	(48 genes)	IEA
GO:0030599 [list] [network] pectinesterase activity	(60 genes)	IEA

Protein

XP_002265217.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, vacu 1, golg 1

(predict for XP_002265217.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002265217.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100232847	vvi-r.5 for 100232847	vvi-m.5 for 100232847	ath-u.5 for PME1	gma-u.5 for 100777128	gma-u.5 for 100784642	ppo-u.5 for 7471605	mtr-u.5 for 11445925	sly-u.5 for 101245743

Ortholog ID: 11298

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

Symbol

PME1

Function^*

pectinesterase 3

pectin methylesterase 1

pectinesterase 3

pectinesterase 3-like

pectinesterase 1

pectinesterase 3

pectinesterase 1

pectinesterase 1-like

pectinesterase 3

pectinesterase 1-like

pectinesterase 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr01250	Biosynthesis of nucleotide sugars	3
mtr00051	Fructose and mannose metabolism	2
mtr00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2
ghi03022	Basal transcription factors	2

Expression

Expression pattern

Entrez Gene ID^*

100232847

841821

100784642

100777128

103848507

103871107

7471605

11445925

107958344

107897672

106345802

125601677

102620200

101245743

102588428

107771445

107788952

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100232847 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100232847 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	3	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100232847 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100232847 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**