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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100241327   uncharacterized LOC100241327 
 vvi-r.5   100241327   uncharacterized LOC100241327 
 vvi-m.5   100241327   uncharacterized LOC100241327 
 ath-u.5   AT1G22910   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G33470   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100791707   probable RNA-binding protein ARP1 
 gma-u.5   100781647   RNA-binding protein 24 
 gma-u.5   100779046   RNA-binding protein 24 
 bra-r.6   103840817   probable RNA-binding protein ARP1 
 bra-r.6   103874783   RNA-binding protein 38 
 ppo-u.5   7479024   uncharacterized LOC7479024 
 ppo-u.5   18108408   uncharacterized LOC18108408 
 mtr-u.5   11425753   RNA-binding protein 24 
 ghi-r.1   107909131   probable RNA-binding protein ARP1 
 ghi-r.1   107910637   RNA-binding protein 38 
 ghi-r.1   107928355   probable RNA-binding protein ARP1 
 bna-r.1   125575182   RNA-binding protein 38-like 
 bna-r.1   106376944   RNA-binding protein 38-like 
 bna-r.1   106431008   probable RNA-binding protein ARP1 
 cit-r.1   102614164   uncharacterized LOC102614164 
 sly-u.5   101249883   uncharacterized LOC101249883 
 sot-r.1   102584957   probable RNA-binding protein ARP1 
 nta-r.1   107822890   uncharacterized LOC107822890 
 nta-r.1   107816572   uncharacterized LOC107816572 
 osa-u.5   4325083   uncharacterized LOC4325083 
 zma-u.5   103636431   RNA-binding protein 24-B 
 zma-u.5   103650932   RNA-binding protein 24-B-like 
 tae-r.2   123079957   RNA-binding protein 24-B 
 tae-r.2   123071614   RNA-binding protein 24-B 
 tae-r.2   123062796   RNA-binding protein 24-B 
 hvu-r.1   123444748   RNA-binding protein 24-B-like 
 sbi-r.1   8063122   RNA-binding protein 24-B 
 bdi-r.1   100841513   RNA-binding protein 24-B 

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Top 50 coexpressed genes to 100241327 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100241327 (vvi-u.5 coexpression data)

CoexMap"100241327"


vviLOC100241327 | Entrez gene ID : 100241327      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 2 1 3 3 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002266779.1 [sequence] [blastp]
XP_010644001.1 [sequence] [blastp]
XP_059590412.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  cyto 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002266779.1)
nucl 5,  mito 3,  cyto_nucl 3  (predict for XP_010644001.1)
nucl 4,  mito 4,  chlo 2  (predict for XP_059590412.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002266779.1)
other 9  (predict for XP_010644001.1)
other 9  (predict for XP_059590412.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100241327
vvi-r.5
for
100241327
vvi-m.5
for
100241327
ath-u.5
for
AT1G22910
ath-u.5
for
AT1G33470
gma-u.5
for
100791707
gma-u.5
for
100781647
gma-u.5
for
100779046
bra-r.6
for
103840817
bra-r.6
for
103874783
ppo-u.5
for
7479024
ppo-u.5
for
18108408
mtr-u.5
for
11425753
ghi-r.1
for
107909131
ghi-r.1
for
107910637
ghi-r.1
for
107928355
bna-r.1
for
125575182
bna-r.1
for
106376944
bna-r.1
for
106431008
cit-r.1
for
102614164
sly-u.5
for
101249883
sot-r.1
for
102584957
nta-r.1
for
107822890
nta-r.1
for
107816572
osa-u.5
for
4325083
zma-u.5
for
103636431
zma-u.5
for
103650932
tae-r.2
for
123079957
tae-r.2
for
123071614
tae-r.2
for
123062796
hvu-r.1
for
123444748
sbi-r.1
for
8063122
bdi-r.1
for
100841513


Ortholog ID: 6138
Species vvi ath ath gma gma gma bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100241327 AT1G22910 AT1G33470 LOC100791707 LOC100781647 LOC100779046 LOC103840817 LOC103874783 LOC7479024 LOC18108408 LOC11425753 LOC107909131 LOC107928355 LOC107887337 LOC125575182 LOC106431008 LOC106429795 LOC102614164 LOC101249883 LOC102584957 LOC107822890 LOC107816572 LOC4325083 LOC103636431 LOC103650932 LOC123079957 LOC123071614 LOC123062796 LOC123444748 LOC8063122 LOC100841513
Function* uncharacterized LOC100241327 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein probable RNA-binding protein ARP1 RNA-binding protein 24 RNA-binding protein 24 probable RNA-binding protein ARP1 RNA-binding protein 38 uncharacterized LOC7479024 uncharacterized LOC18108408 RNA-binding protein 24 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 RNA-binding protein 38 RNA-binding protein 38-like probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 uncharacterized LOC102614164 uncharacterized LOC101249883 probable RNA-binding protein ARP1 uncharacterized LOC107822890 uncharacterized LOC107816572 uncharacterized LOC4325083 RNA-binding protein 24-B RNA-binding protein 24-B-like RNA-binding protein 24-B RNA-binding protein 24-B RNA-binding protein 24-B RNA-binding protein 24-B-like RNA-binding protein 24-B RNA-binding protein 24-B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 5
vvi04141 Protein processing in endoplasmic reticulum 3
vvi05100 Bacterial invasion of epithelial cells 3
vvi04142 Lysosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 4
gma04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01240 Biosynthesis of cofactors 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 5
osa04517 IgSF CAM signaling 5
osa04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100241327 838898 840240 100791707 100781647 100779046 103840817 103874783 7479024 18108408 11425753 107909131 107928355 107887337 125575182 106431008 106429795 102614164 101249883 102584957 107822890 107816572 4325083 103636431 103650932 123079957 123071614 123062796 123444748 8063122 100841513
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