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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100241596   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 vvi-r.5   100241596   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 vvi-m.5   100241596   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 ath-u.5   PnsB1   NDH-dependent cyclic electron flow 1 
 gma-u.5   100803710   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 gma-u.5   100802136   uncharacterized LOC100802136 
 bra-r.6   103872401   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 ppo-u.5   18094258   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 mtr-u.5   11420491   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 ghi-r.1   107960754   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 ghi-r.1   107906420   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 bna-r.1   106346796   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 bna-r.1   106396323   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 cit-r.1   102616560   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 sly-u.5   101247416   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 sot-r.1   102593855   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 nta-r.1   107801003   photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like 
 nta-r.1   107780908   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 osa-u.5   4345153   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 zma-u.5   103653300   Photosynthetic NDH subunit of subcomplex B 1 chloroplastic 
 zma-u.5   100275158   Photosynthetic NDH subunit of subcomplex B 1 chloroplastic 
 tae-r.2   123096170   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 tae-r.2   123091170   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 tae-r.2   123086806   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 hvu-r.1   123451153   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 
 sbi-r.1   8155281   uncharacterized LOC8155281 
 sbi-r.1   110436872   photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like 
 bdi-r.1   100839724   photosynthetic NDH subunit of subcomplex B 1, chloroplastic 

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Top 50 coexpressed genes to 100241596 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100241596 (vvi-u.5 coexpression data)

CoexMap"100241596"


vviLOC100241596 | Entrez gene ID : 100241596      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 1 1 2 2 1 1 1 2 1 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (8 genes)  IEA  
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (5 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
Protein XP_002264393.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_002264393.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002264393.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100241596
vvi-r.5
for
100241596
vvi-m.5
for
100241596
ath-u.5
for
PnsB1
gma-u.5
for
100803710
gma-u.5
for
100802136
bra-r.6
for
103872401
ppo-u.5
for
18094258
mtr-u.5
for
11420491
ghi-r.1
for
107960754
ghi-r.1
for
107906420
bna-r.1
for
106346796
bna-r.1
for
106396323
cit-r.1
for
102616560
sly-u.5
for
101247416
sot-r.1
for
102593855
nta-r.1
for
107801003
nta-r.1
for
107780908
osa-u.5
for
4345153
zma-u.5
for
103653300
zma-u.5
for
100275158
tae-r.2
for
123096170
tae-r.2
for
123091170
tae-r.2
for
123086806
hvu-r.1
for
123451153
sbi-r.1
for
8155281
sbi-r.1
for
110436872
bdi-r.1
for
100839724


Ortholog ID: 9777
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC100241596 PnsB1 LOC100803710 LOC100802136 LOC103872401 LOC18094258 LOC11420491 LOC107960754 LOC107906420 LOC106346796 LOC106396323 LOC102616560 LOC101247416 LOC102593855 LOC107801003 LOC107780908 LOC4345153 LOC103653300 LOC100275158 LOC123096170 LOC123091170 LOC123086806 LOC123451153 LOC8155281 LOC110436872 LOC100839724
Function* photosynthetic NDH subunit of subcomplex B 1, chloroplastic NDH-dependent cyclic electron flow 1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic uncharacterized LOC100802136 photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic Photosynthetic NDH subunit of subcomplex B 1 chloroplastic Photosynthetic NDH subunit of subcomplex B 1 chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic photosynthetic NDH subunit of subcomplex B 1, chloroplastic uncharacterized LOC8155281 photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00710 Carbon fixation by Calvin cycle 4
vvi00195 Photosynthesis 3
vvi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath00630 Glyoxylate and dicarboxylate metabolism 8
ath00260 Glycine, serine and threonine metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00020 Citrate cycle (TCA cycle) 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
mtr01240 Biosynthesis of cofactors 4
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
bna00260 Glycine, serine and threonine metabolism 5
bna00460 Cyanoamino acid metabolism 5
bna00670 One carbon pool by folate 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
bna00260 Glycine, serine and threonine metabolism 5
bna00460 Cyanoamino acid metabolism 5
bna00670 One carbon pool by folate 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly03010 Ribosome 4
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot03010 Ribosome 3
sot00710 Carbon fixation by Calvin cycle 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta01200 Carbon metabolism 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00710 Carbon fixation by Calvin cycle 6
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 4
hvu01200 Carbon metabolism 3
hvu00710 Carbon fixation by Calvin cycle 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi01200 Carbon metabolism 3
bdi00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100241596 838168 100803710 100802136 103872401 18094258 11420491 107960754 107906420 106346796 106396323 102616560 101247416 102593855 107801003 107780908 4345153 103653300 100275158 123096170 123091170 123086806 123451153 8155281 110436872 100839724
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